Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.39□□□□□ -0.11
CSF1P09603 AC122714.2-201ENST00000502787 707 ntBASIC14.39□□□□□ -0.11
CSF1P09603 FOSL1P1-201ENST00000511041 816 ntBASIC14.39□□□□□ -0.11
CSF1P09603 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.39□□□□□ -0.11
CSF1P09603 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.39□□□□□ -0.11
CSF1P09603 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.39□□□□□ -0.11
CSF1P09603 TPSP2-201ENST00000561760 610 ntBASIC14.39□□□□□ -0.11
CSF1P09603 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.39□□□□□ -0.11
CSF1P09603 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.39□□□□□ -0.11
CSF1P09603 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CSF1P09603 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
CSF1P09603 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC14.39□□□□□ -0.11
CSF1P09603 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CSF1P09603 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CSF1P09603 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
CSF1P09603 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 AL136379.1-201ENST00000623471 2642 ntBASIC14.38□□□□□ -0.11
CSF1P09603 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 AL022342.1-201ENST00000400363 863 ntBASIC14.38□□□□□ -0.11
CSF1P09603 AP000347.1-202ENST00000435868 847 ntBASIC14.38□□□□□ -0.11
CSF1P09603 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.38□□□□□ -0.11
CSF1P09603 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC14.38□□□□□ -0.11
CSF1P09603 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.38□□□□□ -0.11
CSF1P09603 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.38□□□□□ -0.11
CSF1P09603 AL160237.2-201ENST00000556165 472 ntBASIC14.38□□□□□ -0.11
CSF1P09603 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.38□□□□□ -0.11
CSF1P09603 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC14.38□□□□□ -0.11
CSF1P09603 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.38□□□□□ -0.11
CSF1P09603 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
CSF1P09603 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 AL031008.1-201ENST00000619963 541 ntBASIC14.38□□□□□ -0.11
CSF1P09603 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
CSF1P09603 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 AL049757.1-201ENST00000616842 1596 ntBASIC14.38□□□□□ -0.11
CSF1P09603 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC14.38□□□□□ -0.11
CSF1P09603 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.38□□□□□ -0.11
CSF1P09603 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.38□□□□□ -0.11
CSF1P09603 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
CSF1P09603 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
CSF1P09603 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
CSF1P09603 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CSF1P09603 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
CSF1P09603 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC14.37□□□□□ -0.11
CSF1P09603 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
CSF1P09603 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
CSF1P09603 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms