Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.71□□□□□ -0.05
APOC1P02654 MYB-201ENST00000316528 3571 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 MYB-241ENST00000616088 3573 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.71□□□□□ -0.05
APOC1P02654 AC073648.2-201ENST00000510116 352 ntBASIC14.71□□□□□ -0.05
APOC1P02654 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 SDHD-206ENST00000528182 754 ntTSL 3 BASIC14.71□□□□□ -0.05
APOC1P02654 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC14.71□□□□□ -0.05
APOC1P02654 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 SDCCAG3P1-201ENST00000589292 1150 ntBASIC14.71□□□□□ -0.05
APOC1P02654 AP001350.2-201ENST00000625104 1094 ntBASIC14.71□□□□□ -0.05
APOC1P02654 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
APOC1P02654 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC14.71□□□□□ -0.05
APOC1P02654 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.71□□□□□ -0.05
APOC1P02654 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC14.71□□□□□ -0.06
APOC1P02654 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.06
APOC1P02654 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
APOC1P02654 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC14.71□□□□□ -0.06
APOC1P02654 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
APOC1P02654 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
APOC1P02654 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
APOC1P02654 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
APOC1P02654 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.7□□□□□ -0.06
APOC1P02654 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
APOC1P02654 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
APOC1P02654 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.7□□□□□ -0.06
APOC1P02654 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 CA12-203ENST00000422263 2556 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.7□□□□□ -0.06
APOC1P02654 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
APOC1P02654 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC14.7□□□□□ -0.06
APOC1P02654 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 AC087163.2-201ENST00000457299 853 ntBASIC14.7□□□□□ -0.06
APOC1P02654 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC14.7□□□□□ -0.06
APOC1P02654 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.7□□□□□ -0.06
APOC1P02654 AC107918.4-202ENST00000641623 219 ntBASIC14.7□□□□□ -0.06
APOC1P02654 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
APOC1P02654 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
APOC1P02654 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
APOC1P02654 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
APOC1P02654 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
APOC1P02654 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.69□□□□□ -0.06
APOC1P02654 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
APOC1P02654 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC14.69□□□□□ -0.06
APOC1P02654 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.69□□□□□ -0.06
APOC1P02654 LINC02199-201ENST00000506655 2702 ntBASIC14.69□□□□□ -0.06
APOC1P02654 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
APOC1P02654 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.69□□□□□ -0.06
APOC1P02654 PTCHD3P3-201ENST00000403073 906 ntBASIC14.69□□□□□ -0.06
APOC1P02654 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC14.69□□□□□ -0.06
APOC1P02654 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC14.69□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms