Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 AL136038.3-201ENST00000561909 1096 ntBASIC13.6□□□□□ -0.23
CLN5O75503 RN7SL850P-201ENST00000579959 291 ntBASIC13.6□□□□□ -0.23
CLN5O75503 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC13.6□□□□□ -0.23
CLN5O75503 AL138831.2-201ENST00000606564 490 ntBASIC13.6□□□□□ -0.23
CLN5O75503 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLN5O75503 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLN5O75503 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLN5O75503 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC13.6□□□□□ -0.23
CLN5O75503 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC13.6□□□□□ -0.23
CLN5O75503 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLN5O75503 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC13.6□□□□□ -0.23
CLN5O75503 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
CLN5O75503 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
CLN5O75503 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
CLN5O75503 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.6□□□□□ -0.23
CLN5O75503 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC13.6□□□□□ -0.23
CLN5O75503 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.6□□□□□ -0.23
CLN5O75503 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLN5O75503 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLN5O75503 AL359183.1-201ENST00000623796 2132 ntBASIC13.6□□□□□ -0.23
CLN5O75503 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.6□□□□□ -0.23
CLN5O75503 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLN5O75503 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC13.6□□□□□ -0.23
CLN5O75503 AC006058.4-201ENST00000624016 1670 ntBASIC13.59□□□□□ -0.23
CLN5O75503 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CLN5O75503 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC13.59□□□□□ -0.23
CLN5O75503 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
CLN5O75503 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC13.59□□□□□ -0.23
CLN5O75503 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC13.59□□□□□ -0.23
CLN5O75503 ATP6V0A4-201ENST00000310018 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
CLN5O75503 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC13.59□□□□□ -0.23
CLN5O75503 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 KRT8P26-201ENST00000534154 1276 ntBASIC13.59□□□□□ -0.23
CLN5O75503 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC13.59□□□□□ -0.23
CLN5O75503 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.59□□□□□ -0.23
CLN5O75503 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.59□□□□□ -0.23
CLN5O75503 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.59□□□□□ -0.23
CLN5O75503 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 AC138969.2-201ENST00000532739 9932 ntBASIC13.59□□□□□ -0.23
CLN5O75503 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CLN5O75503 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CLN5O75503 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
CLN5O75503 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CLN5O75503 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC13.59□□□□□ -0.23
CLN5O75503 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC13.59□□□□□ -0.23
CLN5O75503 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
CLN5O75503 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
CLN5O75503 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
CLN5O75503 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
CLN5O75503 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.58□□□□□ -0.23
CLN5O75503 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
CLN5O75503 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.58□□□□□ -0.23
CLN5O75503 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CLN5O75503 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
CLN5O75503 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
CLN5O75503 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
CLN5O75503 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC13.58□□□□□ -0.24
CLN5O75503 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC13.58□□□□□ -0.24
CLN5O75503 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC13.58□□□□□ -0.24
CLN5O75503 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 ENSA-206ENST00000361631 725 ntTSL 2 BASIC13.58□□□□□ -0.24
CLN5O75503 RCN1P1-201ENST00000400413 996 ntBASIC13.58□□□□□ -0.24
CLN5O75503 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
CLN5O75503 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC13.58□□□□□ -0.24
CLN5O75503 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC13.58□□□□□ -0.24
CLN5O75503 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms