Protein–RNA interactions for Protein: Q9Y4X4

KLF12, Krueppel-like factor 12, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLF12Q9Y4X4 TSSC2-201ENST00000450217 709 ntBASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 TERC-201ENST00000602385 541 ntBASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
KLF12Q9Y4X4 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
KLF12Q9Y4X4 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC12.65□□□□□ -0.39
KLF12Q9Y4X4 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC12.65□□□□□ -0.39
KLF12Q9Y4X4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
KLF12Q9Y4X4 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.39
KLF12Q9Y4X4 SLC6A8-201ENST00000253122 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
KLF12Q9Y4X4 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
KLF12Q9Y4X4 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 BET1L-202ENST00000332865 533 ntTSL 5 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ISCU-203ENST00000431221 799 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ABR-204ENST00000543210 1049 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ABR-217ENST00000572441 563 ntTSL 4 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 LINC01144-201ENST00000626198 1710 ntBASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 IER3-202ENST00000376377 1350 ntBASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
KLF12Q9Y4X4 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 KRT8P39-201ENST00000396270 1433 ntBASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 AC069224.1-201ENST00000566372 1715 ntBASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 AL020989.1-201ENST00000422979 469 ntBASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC12.63□□□□□ -0.39
KLF12Q9Y4X4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC12.63□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms