Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 MIR943-201ENST00000401286 94 ntBASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 DUT-210ENST00000559935 569 ntTSL 3 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AC005498.2-205ENST00000593218 784 ntBASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AC020765.3-201ENST00000613051 740 ntBASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 SPTSSB-204ENST00000617024 1292 ntBASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AL031731.1-201ENST00000642131 2094 ntBASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 AC006538.1-201ENST00000567905 1585 ntBASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
LINC00588Q9Y4M8 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 GPAA1P2-202ENST00000606848 1787 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 FOXO1B-201ENST00000504678 1527 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 HLA-H-201ENST00000383620 1096 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 WRB-204ENST00000398753 699 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PPP6R2P1-201ENST00000450880 1275 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 HLA-J-202ENST00000469281 1241 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AC093214.1-201ENST00000511688 1107 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AC140878.1-201ENST00000565277 250 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 MIR4453-201ENST00000584019 89 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AC003101.2-201ENST00000612557 442 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AC018529.1-201ENST00000613063 361 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 MST1L-201ENST00000442552 2185 ntBASIC11.31□□□□□ -0.6
LINC00588Q9Y4M8 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms