Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.63□□□□□ -0.39
VGLL1Q99990 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12.63□□□□□ -0.39
VGLL1Q99990 AC024909.3-201ENST00000611513 2257 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC12.63□□□□□ -0.39
VGLL1Q99990 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
VGLL1Q99990 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
VGLL1Q99990 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC12.63□□□□□ -0.39
VGLL1Q99990 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 RBSN-204ENST00000449050 903 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC12.63□□□□□ -0.39
VGLL1Q99990 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC12.63□□□□□ -0.39
VGLL1Q99990 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC12.63□□□□□ -0.39
VGLL1Q99990 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 AC087388.1-201ENST00000571370 1112 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC12.63□□□□□ -0.39
VGLL1Q99990 MIR5100-201ENST00000579544 119 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC12.63□□□□□ -0.39
VGLL1Q99990 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
VGLL1Q99990 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC12.63□□□□□ -0.39
VGLL1Q99990 AC092329.2-201ENST00000598402 547 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 AC099336.1-202ENST00000602961 463 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 AC013467.2-201ENST00000605472 835 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 AC010331.1-201ENST00000611423 582 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
VGLL1Q99990 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC12.63□□□□□ -0.39
VGLL1Q99990 AL139011.1-202ENST00000642063 584 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 IER3-202ENST00000376377 1350 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 AL671710.1-201ENST00000610245 2349 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
VGLL1Q99990 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC12.63□□□□□ -0.39
VGLL1Q99990 LINC02228-204ENST00000642115 2962 ntBASIC12.63□□□□□ -0.39
VGLL1Q99990 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 TBC1D16-209ENST00000576768 6342 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
VGLL1Q99990 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC12.62□□□□□ -0.39
VGLL1Q99990 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.62□□□□□ -0.39
VGLL1Q99990 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 AL596087.1-201ENST00000400979 1969 ntBASIC12.62□□□□□ -0.39
VGLL1Q99990 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
VGLL1Q99990 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
VGLL1Q99990 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 NUS1P2-201ENST00000417358 873 ntBASIC12.62□□□□□ -0.39
VGLL1Q99990 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
VGLL1Q99990 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC12.62□□□□□ -0.39
VGLL1Q99990 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC12.62□□□□□ -0.39
VGLL1Q99990 RMI2-205ENST00000576027 818 ntTSL 2 BASIC12.62□□□□□ -0.39
VGLL1Q99990 MIR3180-1-201ENST00000580374 94 ntBASIC12.62□□□□□ -0.39
VGLL1Q99990 MIR3180-3-201ENST00000584616 94 ntBASIC12.62□□□□□ -0.39
VGLL1Q99990 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 AL353135.1-201ENST00000606729 504 ntBASIC12.62□□□□□ -0.39
VGLL1Q99990 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC12.62□□□□□ -0.39
VGLL1Q99990 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC12.62□□□□□ -0.39
VGLL1Q99990 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
VGLL1Q99990 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms