Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
SHROOM1Q2M3G4 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHROOM1Q2M3G4 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHROOM1Q2M3G4 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.18■□□□□ 0.66
SHROOM1Q2M3G4 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SHROOM1Q2M3G4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
SHROOM1Q2M3G4 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 NBL1-201ENST00000289749 731 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 PGF-202ENST00000405431 666 ntTSL 5 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 COX5BP8-201ENST00000416911 349 ntBASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 API5-211ENST00000534695 560 ntTSL 5 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 CDK4-206ENST00000549606 558 ntTSL 2 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 NAA38-207ENST00000576861 556 ntTSL 3 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 PRR29-204ENST00000577953 565 ntTSL 4 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 RAB34-223ENST00000636154 730 ntTSL 2 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 AC022211.2-201ENST00000585075 2527 ntBASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SHROOM1Q2M3G4 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 AC135586.1-201ENST00000539323 574 ntBASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 SSH2-210ENST00000582084 560 ntTSL 3 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SHROOM1Q2M3G4 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 FAM166B-201ENST00000399742 958 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 HLA-A-202ENST00000376806 1854 ntBASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 AC007541.1-201ENST00000570282 1469 ntBASIC19.15■□□□□ 0.66
SHROOM1Q2M3G4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms