Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NCKAP1LP55160 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.49
NCKAP1LP55160 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.08■□□□□ 0.48
NCKAP1LP55160 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.08■□□□□ 0.48
NCKAP1LP55160 AP001160.2-201ENST00000596071 487 ntBASIC18.08■□□□□ 0.48
NCKAP1LP55160 AC027612.4-201ENST00000605371 583 ntBASIC18.08■□□□□ 0.48
NCKAP1LP55160 AL596442.2-201ENST00000610240 980 ntBASIC18.08■□□□□ 0.48
NCKAP1LP55160 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC18.08■□□□□ 0.48
NCKAP1LP55160 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 RELA-227ENST00000615805 2236 ntTSL 5 BASIC18.08■□□□□ 0.48
NCKAP1LP55160 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
NCKAP1LP55160 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
NCKAP1LP55160 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NCKAP1LP55160 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 RPS8P6-201ENST00000426177 609 ntBASIC18.07■□□□□ 0.48
NCKAP1LP55160 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 GPALPP1-207ENST00000611650 899 ntBASIC18.07■□□□□ 0.48
NCKAP1LP55160 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NCKAP1LP55160 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC18.07■□□□□ 0.48
NCKAP1LP55160 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 AL118508.1-201ENST00000613502 2345 ntBASIC18.06■□□□□ 0.48
NCKAP1LP55160 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 FAM58DP-201ENST00000428076 619 ntBASIC18.06■□□□□ 0.48
NCKAP1LP55160 AC005237.2-201ENST00000434368 219 ntBASIC18.06■□□□□ 0.48
NCKAP1LP55160 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 SLC25A39P2-201ENST00000537614 270 ntBASIC18.06■□□□□ 0.48
NCKAP1LP55160 TSFM-210ENST00000550559 897 ntTSL 5 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 SNHG9-202ENST00000564014 471 ntBASIC18.06■□□□□ 0.48
NCKAP1LP55160 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 AC079781.4-201ENST00000641908 219 ntBASIC18.06■□□□□ 0.48
NCKAP1LP55160 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NCKAP1LP55160 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
NCKAP1LP55160 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.05■□□□□ 0.48
NCKAP1LP55160 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NCKAP1LP55160 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC18.05■□□□□ 0.48
NCKAP1LP55160 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 47.9 ms