Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
CLCN2P51788 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN2P51788 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN2P51788 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN2P51788 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.12■□□□□ 0.17
CLCN2P51788 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN2P51788 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN2P51788 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN2P51788 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN2P51788 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CLCN2P51788 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.11■□□□□ 0.17
CLCN2P51788 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN2P51788 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN2P51788 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN2P51788 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN2P51788 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN2P51788 KRT18P27-201ENST00000427733 1299 ntBASIC16.11■□□□□ 0.17
CLCN2P51788 AC098831.1-202ENST00000438821 336 ntBASIC16.11■□□□□ 0.17
CLCN2P51788 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN2P51788 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 AC136632.2-201ENST00000512891 861 ntBASIC16.11■□□□□ 0.17
CLCN2P51788 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.11■□□□□ 0.17
CLCN2P51788 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN2P51788 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
CLCN2P51788 CYGB-205ENST00000590175 830 ntTSL 3 BASIC16.11■□□□□ 0.17
CLCN2P51788 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.11■□□□□ 0.17
CLCN2P51788 AL356488.2-201ENST00000602755 427 ntBASIC16.11■□□□□ 0.17
CLCN2P51788 AL139424.1-201ENST00000607572 797 ntBASIC16.11■□□□□ 0.17
CLCN2P51788 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC16.11■□□□□ 0.17
CLCN2P51788 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN2P51788 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CLCN2P51788 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CLCN2P51788 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.11■□□□□ 0.17
CLCN2P51788 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 AP002414.3-201ENST00000589352 1468 ntBASIC16.1■□□□□ 0.17
CLCN2P51788 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
CLCN2P51788 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.1■□□□□ 0.17
CLCN2P51788 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.1■□□□□ 0.17
CLCN2P51788 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.1■□□□□ 0.17
CLCN2P51788 LINC00982-205ENST00000420957 435 ntBASIC16.1■□□□□ 0.17
CLCN2P51788 ACTG1P4-201ENST00000425123 1122 ntBASIC16.1■□□□□ 0.17
CLCN2P51788 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.1■□□□□ 0.17
CLCN2P51788 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 ETFA-208ENST00000559602 792 ntTSL 3 BASIC16.1■□□□□ 0.17
CLCN2P51788 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.1■□□□□ 0.17
CLCN2P51788 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.1■□□□□ 0.17
CLCN2P51788 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CLCN2P51788 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CLCN2P51788 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CLCN2P51788 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLCN2P51788 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
CLCN2P51788 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CLCN2P51788 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CLCN2P51788 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms