Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 AC100757.3-201ENST00000622361 1406 ntBASIC17.55■□□□□ 0.4
BRCC3P46736 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
BRCC3P46736 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
BRCC3P46736 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC17.54■□□□□ 0.4
BRCC3P46736 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.54■□□□□ 0.4
BRCC3P46736 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.54■□□□□ 0.4
BRCC3P46736 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 AL353705.2-201ENST00000428243 662 ntBASIC17.54■□□□□ 0.4
BRCC3P46736 AC241585.1-201ENST00000433527 519 ntBASIC17.54■□□□□ 0.4
BRCC3P46736 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.54■□□□□ 0.4
BRCC3P46736 MTND6P24-201ENST00000440466 518 ntBASIC17.54■□□□□ 0.4
BRCC3P46736 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC17.54■□□□□ 0.4
BRCC3P46736 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
BRCC3P46736 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 RN7SL204P-201ENST00000582831 262 ntBASIC17.54■□□□□ 0.4
BRCC3P46736 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 AL590560.3-201ENST00000623350 461 ntBASIC17.54■□□□□ 0.4
BRCC3P46736 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC17.54■□□□□ 0.4
BRCC3P46736 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
BRCC3P46736 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
BRCC3P46736 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
BRCC3P46736 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.54■□□□□ 0.4
BRCC3P46736 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
BRCC3P46736 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCC3P46736 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCC3P46736 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCC3P46736 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BRCC3P46736 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.53■□□□□ 0.4
BRCC3P46736 AC002472.2-201ENST00000442739 958 ntBASIC17.53■□□□□ 0.4
BRCC3P46736 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 HLA-J-202ENST00000469281 1241 ntBASIC17.53■□□□□ 0.4
BRCC3P46736 AC004890.2-204ENST00000481968 304 ntBASIC17.53■□□□□ 0.4
BRCC3P46736 MAX-210ENST00000555419 765 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCC3P46736 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCC3P46736 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCC3P46736 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCC3P46736 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
BRCC3P46736 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCC3P46736 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.53■□□□□ 0.4
BRCC3P46736 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC17.53■□□□□ 0.4
BRCC3P46736 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
BRCC3P46736 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC17.52■□□□□ 0.4
BRCC3P46736 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BRCC3P46736 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.52■□□□□ 0.4
BRCC3P46736 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC17.52■□□□□ 0.4
BRCC3P46736 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
BRCC3P46736 TSSK5P-201ENST00000423978 907 ntBASIC17.52■□□□□ 0.4
BRCC3P46736 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
BRCC3P46736 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 44.9 ms