Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC5P40937 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC5P40937 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC5P40937 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
RFC5P40937 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC5P40937 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC5P40937 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
RFC5P40937 AC046158.3-201ENST00000624947 2558 ntBASIC18.24■□□□□ 0.51
RFC5P40937 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
RFC5P40937 LINC01144-201ENST00000626198 1710 ntBASIC18.23■□□□□ 0.51
RFC5P40937 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 AC080080.1-201ENST00000625121 2420 ntBASIC18.23■□□□□ 0.51
RFC5P40937 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFC5P40937 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.23■□□□□ 0.51
RFC5P40937 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RFC5P40937 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.23■□□□□ 0.51
RFC5P40937 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
RFC5P40937 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.23■□□□□ 0.51
RFC5P40937 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC18.23■□□□□ 0.51
RFC5P40937 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
RFC5P40937 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.23■□□□□ 0.51
RFC5P40937 RARRES2P9-201ENST00000565168 469 ntBASIC18.23■□□□□ 0.51
RFC5P40937 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC18.23■□□□□ 0.51
RFC5P40937 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.23■□□□□ 0.51
RFC5P40937 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
RFC5P40937 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 AP3S2-216ENST00000617003 1561 ntBASIC18.22■□□□□ 0.51
RFC5P40937 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 FAM220BP-201ENST00000377689 816 ntBASIC18.22■□□□□ 0.51
RFC5P40937 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 AL355385.1-201ENST00000606123 409 ntBASIC18.22■□□□□ 0.51
RFC5P40937 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.22■□□□□ 0.51
RFC5P40937 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.22■□□□□ 0.51
RFC5P40937 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.22■□□□□ 0.51
RFC5P40937 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
RFC5P40937 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms