Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.65■□□□□ 0.26
APOA4P06727 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.65■□□□□ 0.26
APOA4P06727 CUX1-213ENST00000549414 4452 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
APOA4P06727 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 GGT3P-204ENST00000453783 1664 ntBASIC16.65■□□□□ 0.26
APOA4P06727 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.65■□□□□ 0.26
APOA4P06727 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 AL365203.3-201ENST00000609742 2057 ntBASIC16.65■□□□□ 0.26
APOA4P06727 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.65■□□□□ 0.26
APOA4P06727 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
APOA4P06727 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
APOA4P06727 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.64■□□□□ 0.26
APOA4P06727 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.64■□□□□ 0.26
APOA4P06727 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC16.64■□□□□ 0.25
APOA4P06727 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.64■□□□□ 0.25
APOA4P06727 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APOA4P06727 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.64■□□□□ 0.25
APOA4P06727 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
APOA4P06727 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.64■□□□□ 0.25
APOA4P06727 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
APOA4P06727 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.64■□□□□ 0.25
APOA4P06727 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.64■□□□□ 0.25
APOA4P06727 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 RNA5SP415-201ENST00000517246 115 ntBASIC16.64■□□□□ 0.25
APOA4P06727 IGHV3-22-201ENST00000520721 359 ntBASIC16.64■□□□□ 0.25
APOA4P06727 UNC93B6-202ENST00000528242 690 ntBASIC16.64■□□□□ 0.25
APOA4P06727 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.64■□□□□ 0.25
APOA4P06727 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.64■□□□□ 0.25
APOA4P06727 MIR4751-201ENST00000578027 74 ntBASIC16.64■□□□□ 0.25
APOA4P06727 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 AC010654.1-201ENST00000615722 808 ntBASIC16.64■□□□□ 0.25
APOA4P06727 AC004790.2-201ENST00000623588 572 ntBASIC16.64■□□□□ 0.25
APOA4P06727 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC16.64■□□□□ 0.25
APOA4P06727 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.64■□□□□ 0.25
APOA4P06727 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC16.64■□□□□ 0.25
APOA4P06727 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.64■□□□□ 0.25
APOA4P06727 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.64■□□□□ 0.25
APOA4P06727 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
APOA4P06727 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
APOA4P06727 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
APOA4P06727 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
APOA4P06727 AC008741.2-201ENST00000612792 3115 ntBASIC16.63■□□□□ 0.25
APOA4P06727 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.63■□□□□ 0.25
APOA4P06727 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 PRSS29P-201ENST00000440800 595 ntBASIC16.63■□□□□ 0.25
APOA4P06727 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.63■□□□□ 0.25
APOA4P06727 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.63■□□□□ 0.25
APOA4P06727 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 REXO1L3P-201ENST00000622202 1288 ntBASIC16.63■□□□□ 0.25
APOA4P06727 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
APOA4P06727 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
APOA4P06727 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.63■□□□□ 0.25
APOA4P06727 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
APOA4P06727 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.62■□□□□ 0.25
APOA4P06727 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
APOA4P06727 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms