Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 AL021920.2-201ENST00000624828 1351 ntBASIC14.97□□□□□ -0.01
HLA-DPB1P04440 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC14.97□□□□□ -0.01
HLA-DPB1P04440 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.96□□□□□ -0.01
HLA-DPB1P04440 NKTR-203ENST00000442970 646 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 KRT16P4-201ENST00000453883 522 ntBASIC14.96□□□□□ -0.01
HLA-DPB1P04440 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.96□□□□□ -0.01
HLA-DPB1P04440 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
HLA-DPB1P04440 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AMT-233ENST00000636522 1620 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 KRT18P31-201ENST00000506277 1292 ntBASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AL121772.3-201ENST00000610840 674 ntBASIC14.95□□□□□ -0.02
HLA-DPB1P04440 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
HLA-DPB1P04440 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms