Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT6AP02538 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.11■□□□□ 0.17
KRT6AP02538 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 GGT4P-201ENST00000623672 1708 ntBASIC16.11■□□□□ 0.17
KRT6AP02538 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
KRT6AP02538 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
KRT6AP02538 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 EFNB3-201ENST00000226091 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT6AP02538 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 RPS2P28-201ENST00000314255 741 ntBASIC16.1■□□□□ 0.17
KRT6AP02538 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT6AP02538 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT6AP02538 AF186996.4-201ENST00000467186 377 ntBASIC16.1■□□□□ 0.17
KRT6AP02538 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT6AP02538 IGHV3-65-201ENST00000523210 341 ntBASIC16.1■□□□□ 0.17
KRT6AP02538 AC105339.3-201ENST00000560043 636 ntBASIC16.1■□□□□ 0.17
KRT6AP02538 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.1■□□□□ 0.17
KRT6AP02538 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 CHN1-205ENST00000409900 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.1■□□□□ 0.17
KRT6AP02538 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
KRT6AP02538 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.1■□□□□ 0.17
KRT6AP02538 TAF1B-201ENST00000263663 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT6AP02538 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT6AP02538 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KRT6AP02538 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT6AP02538 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
KRT6AP02538 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 FAM197Y8-203ENST00000450145 560 ntBASIC16.09■□□□□ 0.17
KRT6AP02538 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT6AP02538 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.09■□□□□ 0.17
KRT6AP02538 AL356488.2-201ENST00000602755 427 ntBASIC16.09■□□□□ 0.17
KRT6AP02538 AL121912.1-201ENST00000603683 238 ntBASIC16.09■□□□□ 0.17
KRT6AP02538 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.09■□□□□ 0.17
KRT6AP02538 AC005593.1-201ENST00000624894 515 ntBASIC16.09■□□□□ 0.17
KRT6AP02538 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
KRT6AP02538 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.09■□□□□ 0.17
KRT6AP02538 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
KRT6AP02538 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms