Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
HCN1O60741 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC15.56■□□□□ 0.08
HCN1O60741 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.55■□□□□ 0.08
HCN1O60741 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
HCN1O60741 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 BANP-204ENST00000393208 2283 ntTSL 2 BASIC15.55■□□□□ 0.08
HCN1O60741 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 PI4KAP1-204ENST00000612579 1703 ntBASIC15.55■□□□□ 0.08
HCN1O60741 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 AC022188.1-201ENST00000620960 1664 ntBASIC15.55■□□□□ 0.08
HCN1O60741 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 RPSAP43-201ENST00000402237 625 ntBASIC15.55■□□□□ 0.08
HCN1O60741 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 GPX1P2-201ENST00000429271 606 ntBASIC15.55■□□□□ 0.08
HCN1O60741 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC15.55■□□□□ 0.08
HCN1O60741 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.55■□□□□ 0.08
HCN1O60741 COX5A-206ENST00000568783 571 ntTSL 3 BASIC15.55■□□□□ 0.08
HCN1O60741 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
HCN1O60741 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC15.55■□□□□ 0.08
HCN1O60741 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC15.55■□□□□ 0.08
HCN1O60741 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
HCN1O60741 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC15.54■□□□□ 0.08
HCN1O60741 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
HCN1O60741 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 TUBB8P12-201ENST00000308911 1335 ntBASIC15.54■□□□□ 0.08
HCN1O60741 TUBB7P-202ENST00000428444 1305 ntBASIC15.54■□□□□ 0.08
HCN1O60741 TUBB8P7-204ENST00000567960 1332 ntBASIC15.54■□□□□ 0.08
HCN1O60741 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 AC023274.1-201ENST00000418278 595 ntBASIC15.54■□□□□ 0.08
HCN1O60741 MCCD1P2-201ENST00000423228 335 ntBASIC15.54■□□□□ 0.08
HCN1O60741 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 KRT18P2-201ENST00000447938 1258 ntBASIC15.54■□□□□ 0.08
HCN1O60741 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
HCN1O60741 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.54■□□□□ 0.08
HCN1O60741 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC15.54■□□□□ 0.08
HCN1O60741 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
HCN1O60741 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC15.54■□□□□ 0.08
HCN1O60741 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
HCN1O60741 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
HCN1O60741 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC15.53■□□□□ 0.08
HCN1O60741 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms