Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM38O00635 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 AC078925.2-201ENST00000624013 1973 ntBASIC16.71■□□□□ 0.27
TRIM38O00635 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM38O00635 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
TRIM38O00635 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
TRIM38O00635 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
TRIM38O00635 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM38O00635 AC087163.2-201ENST00000457299 853 ntBASIC16.71■□□□□ 0.27
TRIM38O00635 HLA-J-203ENST00000494367 1087 ntBASIC16.71■□□□□ 0.27
TRIM38O00635 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM38O00635 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM38O00635 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC16.71■□□□□ 0.27
TRIM38O00635 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM38O00635 AC011467.4-201ENST00000594891 528 ntBASIC16.71■□□□□ 0.27
TRIM38O00635 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 AC093512.1-201ENST00000617969 520 ntBASIC16.71■□□□□ 0.27
TRIM38O00635 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.71■□□□□ 0.27
TRIM38O00635 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 RNF216P1-203ENST00000404404 2427 ntBASIC16.71■□□□□ 0.27
TRIM38O00635 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM38O00635 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.71■□□□□ 0.27
TRIM38O00635 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
TRIM38O00635 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
TRIM38O00635 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM38O00635 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 BANP-204ENST00000393208 2283 ntTSL 2 BASIC16.71■□□□□ 0.27
TRIM38O00635 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
TRIM38O00635 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
TRIM38O00635 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.26
TRIM38O00635 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
TRIM38O00635 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM38O00635 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.7■□□□□ 0.26
TRIM38O00635 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRIM38O00635 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM38O00635 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
TRIM38O00635 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM38O00635 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM38O00635 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM38O00635 AC112191.1-201ENST00000523689 701 ntBASIC16.7■□□□□ 0.26
TRIM38O00635 AC109322.1-201ENST00000524499 1264 ntBASIC16.7■□□□□ 0.26
TRIM38O00635 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM38O00635 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.7■□□□□ 0.26
TRIM38O00635 LSM12-202ENST00000585388 942 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM38O00635 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM38O00635 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM38O00635 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.7■□□□□ 0.26
TRIM38O00635 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 CYP2T1P-202ENST00000641596 2535 ntBASIC16.7■□□□□ 0.26
TRIM38O00635 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
TRIM38O00635 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
TRIM38O00635 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
TRIM38O00635 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM38O00635 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.7■□□□□ 0.26
TRIM38O00635 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.7■□□□□ 0.26
TRIM38O00635 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
TRIM38O00635 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.7■□□□□ 0.26
TRIM38O00635 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
TRIM38O00635 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM38O00635 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC16.69■□□□□ 0.26
TRIM38O00635 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
TRIM38O00635 CALY-203ENST00000368558 825 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC16.69■□□□□ 0.26
TRIM38O00635 ADH5P3-201ENST00000433842 1137 ntBASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms