Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 RPS29-206ENST00000557111 488 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 AL121912.1-201ENST00000603683 238 ntBASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 AL691432.3-201ENST00000621860 400 ntBASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TCRBV7S3A2A0A539 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 AC079781.3-201ENST00000449110 356 ntBASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 AC068594.1-202ENST00000581657 749 ntTSL 3 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 MIR1199-201ENST00000621445 119 ntBASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 AC117500.6-201ENST00000624871 588 ntBASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 AC012569.1-201ENST00000591191 1524 ntBASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 CDC14C-201ENST00000428251 1719 ntBASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
TCRBV7S3A2A0A539 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV7S3A2A0A539 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.83■□□□□ 0.29
TCRBV7S3A2A0A539 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV7S3A2A0A539 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
TCRBV7S3A2A0A539 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 MRPL20P1-201ENST00000400819 433 ntBASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 KRT18P67-201ENST00000432816 1264 ntBASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 AL049840.3-201ENST00000602669 611 ntBASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 AC112504.1-201ENST00000623415 1841 ntBASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 FAM215A-202ENST00000632077 792 ntBASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 VPS51-217ENST00000639871 243 ntTSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TCRBV7S3A2A0A539 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TCRBV7S3A2A0A539 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms