Protein–RNA interactions for Protein: Q9ULM6

CNOT6, CCR4-NOT transcription complex subunit 6, humanhuman

Known RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT6Q9ULM6 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
CNOT6Q9ULM6 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 LINC00895-201ENST00000629028 1637 ntBASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 FAM58CP-201ENST00000435741 640 ntBASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 MKNK2P1-201ENST00000437526 628 ntBASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 AL596257.1-201ENST00000641463 2694 ntBASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CNOT6Q9ULM6 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 SNX33P1-201ENST00000592116 1762 ntBASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 MIR1233-2-201ENST00000408138 82 ntBASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 MIR1233-1-201ENST00000408722 82 ntBASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CNOT6Q9ULM6 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CNOT6Q9ULM6 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT6Q9ULM6 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT6Q9ULM6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT6Q9ULM6 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.61■□□□□ 0.25
CNOT6Q9ULM6 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CNOT6Q9ULM6 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms