Protein–RNA interactions for Protein: Q9UIS9

MBD1, Methyl-CpG-binding domain protein 1, humanhuman

Predicted RBP Predictions only

Length 605 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1Q9UIS9 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD1Q9UIS9 FOXO1B-201ENST00000504678 1527 ntBASIC16.63■□□□□ 0.25
MBD1Q9UIS9 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MBD1Q9UIS9 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
MBD1Q9UIS9 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC16.63■□□□□ 0.25
MBD1Q9UIS9 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
MBD1Q9UIS9 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
MBD1Q9UIS9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
MBD1Q9UIS9 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
MBD1Q9UIS9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 OR8S1-201ENST00000310194 1080 ntBASIC16.62■□□□□ 0.25
MBD1Q9UIS9 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 COX5BP8-201ENST00000416911 349 ntBASIC16.62■□□□□ 0.25
MBD1Q9UIS9 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 RN7SL692P-201ENST00000464677 288 ntBASIC16.62■□□□□ 0.25
MBD1Q9UIS9 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 AC004233.3-201ENST00000607794 1269 ntBASIC16.62■□□□□ 0.25
MBD1Q9UIS9 AC021097.1-201ENST00000607902 574 ntBASIC16.62■□□□□ 0.25
MBD1Q9UIS9 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 TUBB8P12-201ENST00000308911 1335 ntBASIC16.62■□□□□ 0.25
MBD1Q9UIS9 TUBB7P-202ENST00000428444 1305 ntBASIC16.62■□□□□ 0.25
MBD1Q9UIS9 TUBB8P7-204ENST00000567960 1332 ntBASIC16.62■□□□□ 0.25
MBD1Q9UIS9 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
MBD1Q9UIS9 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 AL391256.1-201ENST00000443260 1855 ntBASIC16.61■□□□□ 0.25
MBD1Q9UIS9 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.61■□□□□ 0.25
MBD1Q9UIS9 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
MBD1Q9UIS9 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
MBD1Q9UIS9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
MBD1Q9UIS9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms