Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.93■□□□□ 0.14
PIF1Q9H611 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC15.93■□□□□ 0.14
PIF1Q9H611 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
PIF1Q9H611 KRT18P1-202ENST00000452408 1331 ntBASIC15.93■□□□□ 0.14
PIF1Q9H611 AL671710.1-201ENST00000610245 2349 ntBASIC15.93■□□□□ 0.14
PIF1Q9H611 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PIF1Q9H611 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 AC233702.3-201ENST00000578656 1387 ntBASIC15.92■□□□□ 0.14
PIF1Q9H611 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC15.92■□□□□ 0.14
PIF1Q9H611 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC15.92■□□□□ 0.14
PIF1Q9H611 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PIF1Q9H611 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 CCS-201ENST00000310190 942 ntTSL 5 BASIC15.92■□□□□ 0.14
PIF1Q9H611 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC15.92■□□□□ 0.14
PIF1Q9H611 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
PIF1Q9H611 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
PIF1Q9H611 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC15.92■□□□□ 0.14
PIF1Q9H611 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.92■□□□□ 0.14
PIF1Q9H611 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC15.92■□□□□ 0.14
PIF1Q9H611 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC15.92■□□□□ 0.14
PIF1Q9H611 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC15.92■□□□□ 0.14
PIF1Q9H611 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PIF1Q9H611 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
PIF1Q9H611 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC15.92■□□□□ 0.14
PIF1Q9H611 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC15.92■□□□□ 0.14
PIF1Q9H611 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
PIF1Q9H611 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC15.92■□□□□ 0.14
PIF1Q9H611 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC15.92■□□□□ 0.14
PIF1Q9H611 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PIF1Q9H611 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 LINC00982-205ENST00000420957 435 ntBASIC15.91■□□□□ 0.14
PIF1Q9H611 HLA-J-202ENST00000469281 1241 ntBASIC15.91■□□□□ 0.14
PIF1Q9H611 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC15.91■□□□□ 0.14
PIF1Q9H611 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.91■□□□□ 0.14
PIF1Q9H611 COPE-211ENST00000600932 1144 ntTSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 NPAP1P7-201ENST00000613027 823 ntBASIC15.91■□□□□ 0.14
PIF1Q9H611 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
PIF1Q9H611 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC15.91■□□□□ 0.14
PIF1Q9H611 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
PIF1Q9H611 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
PIF1Q9H611 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC15.9■□□□□ 0.14
PIF1Q9H611 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.9■□□□□ 0.14
PIF1Q9H611 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC15.9■□□□□ 0.14
PIF1Q9H611 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC15.9■□□□□ 0.14
PIF1Q9H611 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
PIF1Q9H611 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.9■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms