Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 VMO1-203ENST00000416307 712 ntTSL 2 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 LSM12-202ENST00000585388 942 ntTSL 3 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 AC015911.4-201ENST00000588022 1070 ntBASIC17.8■□□□□ 0.44
BEST2Q8NFU1 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
BEST2Q8NFU1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.79■□□□□ 0.44
BEST2Q8NFU1 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 GPS2P2-201ENST00000430745 888 ntBASIC17.79■□□□□ 0.44
BEST2Q8NFU1 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 CROCCP1-201ENST00000426910 5675 ntBASIC17.79■□□□□ 0.44
BEST2Q8NFU1 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
BEST2Q8NFU1 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 AC106886.4-201ENST00000623557 2502 ntBASIC17.78■□□□□ 0.44
BEST2Q8NFU1 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 AC142381.1-201ENST00000426099 345 ntBASIC17.78■□□□□ 0.44
BEST2Q8NFU1 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 AP001059.3-201ENST00000619053 235 ntBASIC17.78■□□□□ 0.44
BEST2Q8NFU1 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.78■□□□□ 0.44
BEST2Q8NFU1 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
BEST2Q8NFU1 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms