Protein–RNA interactions for Protein: Q8NBJ5

COLGALT1, Procollagen galactosyltransferase 1, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLGALT1Q8NBJ5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 PRYP6-201ENST00000514804 343 ntBASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 STX3-203ENST00000529177 1571 ntTSL 2 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.82■□□□□ 0.44
COLGALT1Q8NBJ5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 HLA-H-201ENST00000383620 1096 ntBASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 HLA-V-204ENST00000476601 1289 ntBASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 GPER1-207ENST00000619052 571 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 SLC12A2-208ENST00000628403 3617 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
COLGALT1Q8NBJ5 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 AC004233.3-201ENST00000607794 1269 ntBASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.8■□□□□ 0.44
COLGALT1Q8NBJ5 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
COLGALT1Q8NBJ5 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.79■□□□□ 0.44
COLGALT1Q8NBJ5 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
COLGALT1Q8NBJ5 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms