Protein–RNA interactions for Protein: Q86Y07

VRK2, Serine/threonine-protein kinase VRK2, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2Q86Y07 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
VRK2Q86Y07 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC15.37■□□□□ 0.05
VRK2Q86Y07 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 CALM3-211ENST00000598871 561 ntTSL 4 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 AL596087.1-201ENST00000400979 1969 ntBASIC15.36■□□□□ 0.05
VRK2Q86Y07 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 SLC9A3P2-201ENST00000447821 2021 ntBASIC15.36■□□□□ 0.05
VRK2Q86Y07 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
VRK2Q86Y07 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
VRK2Q86Y07 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 AC132872.4-202ENST00000622924 2756 ntBASIC15.35■□□□□ 0.05
VRK2Q86Y07 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 AL450487.1-201ENST00000426799 995 ntBASIC15.35■□□□□ 0.05
VRK2Q86Y07 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 MIR7706-201ENST00000613747 67 ntBASIC15.35■□□□□ 0.05
VRK2Q86Y07 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
VRK2Q86Y07 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
VRK2Q86Y07 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48 ms