Protein–RNA interactions for Protein: P57739

CLDN2, Claudin-2, humanhuman

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2P57739 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CLDN2P57739 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN2P57739 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CLDN2P57739 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN2P57739 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 AC002472.2-201ENST00000442739 958 ntBASIC16.32■□□□□ 0.2
CLDN2P57739 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN2P57739 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CLDN2P57739 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN2P57739 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN2P57739 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN2P57739 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.32■□□□□ 0.2
CLDN2P57739 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 AC073592.8-201ENST00000624126 511 ntBASIC16.32■□□□□ 0.2
CLDN2P57739 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.32■□□□□ 0.2
CLDN2P57739 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.32■□□□□ 0.2
CLDN2P57739 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CLDN2P57739 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.32■□□□□ 0.2
CLDN2P57739 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN2P57739 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN2P57739 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN2P57739 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDN2P57739 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
CLDN2P57739 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN2P57739 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CLDN2P57739 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN2P57739 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN2P57739 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC16.31■□□□□ 0.2
CLDN2P57739 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.31■□□□□ 0.2
CLDN2P57739 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 AC007967.4-201ENST00000614700 386 ntBASIC16.31■□□□□ 0.2
CLDN2P57739 SPDYE12P-201ENST00000618416 771 ntBASIC16.31■□□□□ 0.2
CLDN2P57739 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC16.31■□□□□ 0.2
CLDN2P57739 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.31■□□□□ 0.2
CLDN2P57739 AP001094.4-201ENST00000579008 2176 ntBASIC16.31■□□□□ 0.2
CLDN2P57739 AL603756.1-201ENST00000606511 2163 ntBASIC16.31■□□□□ 0.2
CLDN2P57739 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC16.31■□□□□ 0.2
CLDN2P57739 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 AC005915.1-201ENST00000624912 2018 ntBASIC16.31■□□□□ 0.2
CLDN2P57739 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN2P57739 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CLDN2P57739 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CLDN2P57739 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN2P57739 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN2P57739 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC16.3■□□□□ 0.2
CLDN2P57739 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN2P57739 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
CLDN2P57739 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
CLDN2P57739 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN2P57739 AC241585.1-201ENST00000433527 519 ntBASIC16.3■□□□□ 0.2
CLDN2P57739 OARD1-208ENST00000469104 704 ntTSL 2 BASIC16.3■□□□□ 0.2
CLDN2P57739 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms