Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 UBALD1-205ENST00000590891 2641 ntBASIC10.58□□□□□ -0.72
UBE2AP49459 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 CX3CL1-204ENST00000565912 5796 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC10.58□□□□□ -0.72
UBE2AP49459 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 LINC00982-205ENST00000420957 435 ntBASIC10.58□□□□□ -0.72
UBE2AP49459 RBSN-204ENST00000449050 903 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 AC132008.2-207ENST00000454517 770 ntBASIC10.58□□□□□ -0.72
UBE2AP49459 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 BET1L-206ENST00000486280 665 ntTSL 3 BASIC10.58□□□□□ -0.72
UBE2AP49459 TPM1-218ENST00000559281 851 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC10.58□□□□□ -0.72
UBE2AP49459 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC10.58□□□□□ -0.72
UBE2AP49459 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 CES3-203ENST00000543856 3178 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC10.58□□□□□ -0.72
UBE2AP49459 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC10.58□□□□□ -0.72
UBE2AP49459 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 AC148477.5-201ENST00000625164 1645 ntBASIC10.58□□□□□ -0.72
UBE2AP49459 AC079776.2-201ENST00000641154 1609 ntBASIC10.58□□□□□ -0.72
UBE2AP49459 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC10.58□□□□□ -0.72
UBE2AP49459 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC10.58□□□□□ -0.72
UBE2AP49459 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 HCLS1-202ENST00000428394 1560 ntTSL 2 BASIC10.57□□□□□ -0.72
UBE2AP49459 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
UBE2AP49459 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC10.57□□□□□ -0.72
UBE2AP49459 TCF4-248ENST00000616053 8140 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 MED16-201ENST00000269814 1199 ntTSL 5 BASIC10.57□□□□□ -0.72
UBE2AP49459 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC10.57□□□□□ -0.72
UBE2AP49459 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC10.57□□□□□ -0.72
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms