Protein–RNA interactions for Protein: P43234

CTSO, Cathepsin O, humanhuman

Predicted RBP Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSOP43234 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTSOP43234 FUT2-201ENST00000391876 1593 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTSOP43234 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CTSOP43234 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
CTSOP43234 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.78■□□□□ 0.28
CTSOP43234 PPP6R2P1-201ENST00000450880 1275 ntBASIC16.78■□□□□ 0.28
CTSOP43234 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.78■□□□□ 0.28
CTSOP43234 QPRT-203ENST00000562473 579 ntTSL 3 BASIC16.78■□□□□ 0.28
CTSOP43234 RARRES2P9-201ENST00000565168 469 ntBASIC16.78■□□□□ 0.28
CTSOP43234 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC16.78■□□□□ 0.28
CTSOP43234 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CTSOP43234 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSOP43234 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSOP43234 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.78■□□□□ 0.28
CTSOP43234 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC16.78■□□□□ 0.28
CTSOP43234 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.78■□□□□ 0.28
CTSOP43234 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CTSOP43234 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.78■□□□□ 0.28
CTSOP43234 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSOP43234 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSOP43234 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CTSOP43234 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CTSOP43234 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSOP43234 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSOP43234 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTSOP43234 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.77■□□□□ 0.28
CTSOP43234 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
CTSOP43234 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTSOP43234 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSOP43234 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.77■□□□□ 0.28
CTSOP43234 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CTSOP43234 KLF2P3-201ENST00000451977 1087 ntBASIC16.77■□□□□ 0.28
CTSOP43234 AC125807.1-201ENST00000483097 614 ntBASIC16.77■□□□□ 0.28
CTSOP43234 AC067863.1-201ENST00000494933 530 ntBASIC16.77■□□□□ 0.28
CTSOP43234 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC16.77■□□□□ 0.28
CTSOP43234 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSOP43234 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.77■□□□□ 0.28
CTSOP43234 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSOP43234 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSOP43234 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSOP43234 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CTSOP43234 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSOP43234 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.77■□□□□ 0.28
CTSOP43234 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSOP43234 HLA-A-202ENST00000376806 1854 ntBASIC16.77■□□□□ 0.27
CTSOP43234 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CTSOP43234 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSOP43234 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSOP43234 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSOP43234 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSOP43234 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CTSOP43234 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTSOP43234 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
CTSOP43234 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CTSOP43234 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
CTSOP43234 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CTSOP43234 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CTSOP43234 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSOP43234 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CTSOP43234 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSOP43234 MIR943-201ENST00000401286 94 ntBASIC16.76■□□□□ 0.27
CTSOP43234 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSOP43234 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 AC092171.3-201ENST00000610122 2651 ntBASIC16.76■□□□□ 0.27
CTSOP43234 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.76■□□□□ 0.27
CTSOP43234 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.76■□□□□ 0.27
CTSOP43234 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.76■□□□□ 0.27
CTSOP43234 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.76■□□□□ 0.27
CTSOP43234 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CTSOP43234 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSOP43234 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSOP43234 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSOP43234 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CTSOP43234 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC16.75■□□□□ 0.27
CTSOP43234 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CTSOP43234 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.75■□□□□ 0.27
CTSOP43234 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CTSOP43234 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms