Protein–RNA interactions for Protein: P37840

SNCA, Alpha-synuclein, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAP37840 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 AC009533.2-201ENST00000543664 586 ntBASIC13.73□□□□□ -0.21
SNCAP37840 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC13.73□□□□□ -0.21
SNCAP37840 AC011498.5-201ENST00000592027 486 ntBASIC13.73□□□□□ -0.21
SNCAP37840 AC083849.1-201ENST00000615227 514 ntBASIC13.73□□□□□ -0.21
SNCAP37840 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC13.73□□□□□ -0.21
SNCAP37840 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 HLA-A-202ENST00000376806 1854 ntBASIC13.73□□□□□ -0.21
SNCAP37840 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC13.73□□□□□ -0.21
SNCAP37840 MED25-212ENST00000618715 1467 ntTSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 AC073347.1-201ENST00000421633 2643 ntBASIC13.73□□□□□ -0.21
SNCAP37840 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
SNCAP37840 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.73□□□□□ -0.21
SNCAP37840 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
SNCAP37840 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
SNCAP37840 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC13.72□□□□□ -0.21
SNCAP37840 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC13.72□□□□□ -0.21
SNCAP37840 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 TTC28-AS1-207ENST00000428584 5859 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
SNCAP37840 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13.72□□□□□ -0.21
SNCAP37840 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC13.72□□□□□ -0.21
SNCAP37840 AC211429.1-201ENST00000415277 523 ntBASIC13.72□□□□□ -0.21
SNCAP37840 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.72□□□□□ -0.21
SNCAP37840 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13.72□□□□□ -0.21
SNCAP37840 AC022616.7-201ENST00000525383 220 ntBASIC13.72□□□□□ -0.21
SNCAP37840 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC13.72□□□□□ -0.21
SNCAP37840 FUT8-AS1-201ENST00000621019 1521 ntBASIC13.72□□□□□ -0.21
SNCAP37840 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 AL009178.2-201ENST00000597278 2719 ntBASIC13.72□□□□□ -0.21
SNCAP37840 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
SNCAP37840 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
SNCAP37840 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.72□□□□□ -0.21
SNCAP37840 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC13.72□□□□□ -0.21
SNCAP37840 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
SNCAP37840 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
SNCAP37840 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC13.71□□□□□ -0.21
SNCAP37840 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC13.71□□□□□ -0.21
SNCAP37840 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC13.71□□□□□ -0.21
SNCAP37840 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC13.71□□□□□ -0.21
SNCAP37840 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC13.71□□□□□ -0.21
SNCAP37840 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
SNCAP37840 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC13.71□□□□□ -0.21
SNCAP37840 ALOX12P2-203ENST00000570921 1945 ntBASIC13.71□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 66.6 ms