Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 RARRES2P9-201ENST00000565168 469 ntBASIC18.83■□□□□ 0.6
HOXA13P31271 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HOXA13P31271 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA13P31271 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
HOXA13P31271 FLJ38576-201ENST00000623820 2459 ntBASIC18.83■□□□□ 0.6
HOXA13P31271 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA13P31271 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA13P31271 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA13P31271 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA13P31271 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA13P31271 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA13P31271 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC18.83■□□□□ 0.6
HOXA13P31271 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
HOXA13P31271 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA13P31271 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
HOXA13P31271 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HOXA13P31271 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 NF2-208ENST00000403435 2568 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA13P31271 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC18.82■□□□□ 0.6
HOXA13P31271 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 WRB-204ENST00000398753 699 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXA13P31271 PP14571-201ENST00000404327 934 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA13P31271 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXA13P31271 SPDYE7P-202ENST00000420373 878 ntBASIC18.82■□□□□ 0.6
HOXA13P31271 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA13P31271 HLA-J-202ENST00000469281 1241 ntBASIC18.82■□□□□ 0.6
HOXA13P31271 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 AC067863.1-201ENST00000494933 530 ntBASIC18.82■□□□□ 0.6
HOXA13P31271 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA13P31271 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.82■□□□□ 0.6
HOXA13P31271 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.82■□□□□ 0.6
HOXA13P31271 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.82■□□□□ 0.6
HOXA13P31271 SPTSSB-204ENST00000617024 1292 ntBASIC18.82■□□□□ 0.6
HOXA13P31271 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
HOXA13P31271 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
HOXA13P31271 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HOXA13P31271 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.82■□□□□ 0.6
HOXA13P31271 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
HOXA13P31271 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 GOLGA2P9-201ENST00000596977 1937 ntBASIC18.82■□□□□ 0.6
HOXA13P31271 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
HOXA13P31271 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
HOXA13P31271 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA13P31271 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC18.81■□□□□ 0.6
HOXA13P31271 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXA13P31271 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXA13P31271 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
HOXA13P31271 MIR943-201ENST00000401286 94 ntBASIC18.81■□□□□ 0.6
HOXA13P31271 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA13P31271 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXA13P31271 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC18.81■□□□□ 0.6
HOXA13P31271 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 LTB4R2-202ENST00000528054 3092 ntBASIC18.81■□□□□ 0.6
HOXA13P31271 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC18.81■□□□□ 0.6
HOXA13P31271 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.81■□□□□ 0.6
HOXA13P31271 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
HOXA13P31271 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.8■□□□□ 0.6
HOXA13P31271 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
HOXA13P31271 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA13P31271 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA13P31271 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA13P31271 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA13P31271 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
HOXA13P31271 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA13P31271 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC18.8■□□□□ 0.6
HOXA13P31271 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA13P31271 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA13P31271 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC18.8■□□□□ 0.6
HOXA13P31271 AC079328.2-201ENST00000561241 3354 ntBASIC18.8■□□□□ 0.6
HOXA13P31271 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.8■□□□□ 0.6
HOXA13P31271 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA13P31271 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA13P31271 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
HOXA13P31271 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms