Protein–RNA interactions for Protein: P28067

HLA-DMA, HLA class II histocompatibility antigen, DM alpha chain, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMAP28067 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 CICP14-201ENST00000629111 2732 ntBASIC14.42□□□□□ -0.1
HLA-DMAP28067 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 NAA38-203ENST00000575071 553 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 GPR32P1-201ENST00000601788 811 ntBASIC14.42□□□□□ -0.1
HLA-DMAP28067 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 AC140113.3-201ENST00000605663 199 ntBASIC14.42□□□□□ -0.1
HLA-DMAP28067 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 AC002310.6-201ENST00000624451 1377 ntBASIC14.42□□□□□ -0.1
HLA-DMAP28067 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 AC007191.1-201ENST00000623179 2995 ntBASIC14.42□□□□□ -0.1
HLA-DMAP28067 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
HLA-DMAP28067 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
HLA-DMAP28067 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 TUBB8P12-201ENST00000308911 1335 ntBASIC14.41□□□□□ -0.1
HLA-DMAP28067 TUBB7P-202ENST00000428444 1305 ntBASIC14.41□□□□□ -0.1
HLA-DMAP28067 TUBB8P7-204ENST00000567960 1332 ntBASIC14.41□□□□□ -0.1
HLA-DMAP28067 AL137784.3-201ENST00000623858 2288 ntBASIC14.41□□□□□ -0.1
HLA-DMAP28067 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 ACE-203ENST00000413513 2237 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 AC008550.1-201ENST00000511500 884 ntBASIC14.41□□□□□ -0.1
HLA-DMAP28067 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 CLN6-221ENST00000637494 765 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 AL049757.1-201ENST00000616842 1596 ntBASIC14.41□□□□□ -0.1
HLA-DMAP28067 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 SSR4P1-203ENST00000599569 2260 ntBASIC14.41□□□□□ -0.1
HLA-DMAP28067 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC14.41□□□□□ -0.1
HLA-DMAP28067 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 KIRREL1-202ENST00000360089 3304 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
HLA-DMAP28067 AL109954.1-202ENST00000564051 2148 ntBASIC14.41□□□□□ -0.1
HLA-DMAP28067 AC112504.1-201ENST00000623415 1841 ntBASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms