Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC16.78■□□□□ 0.28
CCND1P24385 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CCND1P24385 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 PAN3-AS1-201ENST00000563843 1351 ntBASIC16.77■□□□□ 0.28
CCND1P24385 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCND1P24385 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
CCND1P24385 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCND1P24385 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCND1P24385 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCND1P24385 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
CCND1P24385 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCND1P24385 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
CCND1P24385 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.77■□□□□ 0.28
CCND1P24385 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC16.77■□□□□ 0.28
CCND1P24385 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.77■□□□□ 0.28
CCND1P24385 AL022326.1-202ENST00000641533 845 ntBASIC16.77■□□□□ 0.28
CCND1P24385 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
CCND1P24385 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.77■□□□□ 0.28
CCND1P24385 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.77■□□□□ 0.28
CCND1P24385 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CCND1P24385 TNRC18P2-201ENST00000417666 2714 ntBASIC16.77■□□□□ 0.28
CCND1P24385 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CCND1P24385 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.27
CCND1P24385 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.77■□□□□ 0.27
CCND1P24385 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCND1P24385 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
CCND1P24385 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 AC148477.5-201ENST00000625164 1645 ntBASIC16.77■□□□□ 0.27
CCND1P24385 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.77■□□□□ 0.27
CCND1P24385 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.27
CCND1P24385 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CCND1P24385 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CCND1P24385 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CCND1P24385 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.76■□□□□ 0.27
CCND1P24385 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.76■□□□□ 0.27
CCND1P24385 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
CCND1P24385 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CCND1P24385 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CCND1P24385 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.76■□□□□ 0.27
CCND1P24385 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC16.76■□□□□ 0.27
CCND1P24385 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.76■□□□□ 0.27
CCND1P24385 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC16.76■□□□□ 0.27
CCND1P24385 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.76■□□□□ 0.27
CCND1P24385 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.76■□□□□ 0.27
CCND1P24385 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.76■□□□□ 0.27
CCND1P24385 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 AC012313.10-201ENST00000623509 926 ntBASIC16.76■□□□□ 0.27
CCND1P24385 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CCND1P24385 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CCND1P24385 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CCND1P24385 MTHFR-217ENST00000641820 1569 ntBASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms