Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC15.58■□□□□ 0.08
PDGFAP04085 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC15.58■□□□□ 0.08
PDGFAP04085 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFAP04085 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC15.58■□□□□ 0.08
PDGFAP04085 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC15.58■□□□□ 0.08
PDGFAP04085 SLC25A39P2-201ENST00000537614 270 ntBASIC15.58■□□□□ 0.08
PDGFAP04085 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 AC005225.4-201ENST00000557330 545 ntBASIC15.58■□□□□ 0.08
PDGFAP04085 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
PDGFAP04085 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PDGFAP04085 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDGFAP04085 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PDGFAP04085 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDGFAP04085 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC15.58■□□□□ 0.08
PDGFAP04085 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC15.58■□□□□ 0.08
PDGFAP04085 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFAP04085 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC15.58■□□□□ 0.08
PDGFAP04085 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PDGFAP04085 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC15.58■□□□□ 0.08
PDGFAP04085 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 AC008741.2-201ENST00000612792 3115 ntBASIC15.57■□□□□ 0.08
PDGFAP04085 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 DOC2GP-204ENST00000639052 2548 ntBASIC15.57■□□□□ 0.08
PDGFAP04085 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PDGFAP04085 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.57■□□□□ 0.08
PDGFAP04085 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC15.57■□□□□ 0.08
PDGFAP04085 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC15.57■□□□□ 0.08
PDGFAP04085 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 HNRNPA1P40-201ENST00000426371 1278 ntBASIC15.57■□□□□ 0.08
PDGFAP04085 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PDGFAP04085 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.57■□□□□ 0.08
PDGFAP04085 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC15.57■□□□□ 0.08
PDGFAP04085 LINC02560-201ENST00000596379 459 ntBASIC15.57■□□□□ 0.08
PDGFAP04085 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 CTSL-203ENST00000343150 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 AC063926.2-201ENST00000623766 1308 ntBASIC15.57■□□□□ 0.08
PDGFAP04085 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.57■□□□□ 0.08
PDGFAP04085 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PDGFAP04085 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 FLJ13224-201ENST00000313737 1514 ntBASIC15.57■□□□□ 0.08
PDGFAP04085 UXT-AS1-201ENST00000590504 1525 ntBASIC15.57■□□□□ 0.08
PDGFAP04085 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
PDGFAP04085 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC15.57■□□□□ 0.08
PDGFAP04085 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
PDGFAP04085 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PDGFAP04085 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
PDGFAP04085 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC15.56■□□□□ 0.08
PDGFAP04085 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 HYMAI-201ENST00000635591 3347 ntBASIC15.56■□□□□ 0.08
PDGFAP04085 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PDGFAP04085 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC15.56■□□□□ 0.08
PDGFAP04085 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms