Protein–RNA interactions for Protein: P01374

LTA, Lymphotoxin-alpha, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTAP01374 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 AL645929.1-201ENST00000420084 975 ntBASIC12.53□□□□□ -0.4
LTAP01374 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC12.53□□□□□ -0.4
LTAP01374 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.53□□□□□ -0.4
LTAP01374 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 CLN6-214ENST00000636314 442 ntTSL 3 BASIC12.53□□□□□ -0.4
LTAP01374 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC12.53□□□□□ -0.4
LTAP01374 AC016027.1-202ENST00000607927 1699 ntBASIC12.53□□□□□ -0.4
LTAP01374 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 PRAL-201ENST00000624952 3286 ntBASIC12.53□□□□□ -0.4
LTAP01374 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 GPAA1P2-202ENST00000606848 1787 ntBASIC12.53□□□□□ -0.4
LTAP01374 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC12.53□□□□□ -0.4
LTAP01374 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.53□□□□□ -0.4
LTAP01374 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
LTAP01374 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LTAP01374 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LTAP01374 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
LTAP01374 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
LTAP01374 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.4
LTAP01374 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
LTAP01374 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC12.52□□□□□ -0.4
LTAP01374 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC12.52□□□□□ -0.4
LTAP01374 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
LTAP01374 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LTAP01374 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
LTAP01374 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC12.52□□□□□ -0.41
LTAP01374 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC12.52□□□□□ -0.41
LTAP01374 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC12.52□□□□□ -0.41
LTAP01374 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC12.52□□□□□ -0.41
LTAP01374 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC12.52□□□□□ -0.41
LTAP01374 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC12.52□□□□□ -0.41
LTAP01374 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
LTAP01374 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC12.52□□□□□ -0.41
LTAP01374 SIGLEC29P-201ENST00000599873 1114 ntBASIC12.52□□□□□ -0.41
LTAP01374 AC083849.1-201ENST00000615227 514 ntBASIC12.52□□□□□ -0.41
LTAP01374 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC12.52□□□□□ -0.41
LTAP01374 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LTAP01374 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC12.52□□□□□ -0.41
LTAP01374 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.52□□□□□ -0.41
LTAP01374 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
LTAP01374 TP73-AS1-210ENST00000637775 1455 ntBASIC12.52□□□□□ -0.41
LTAP01374 LCK-206ENST00000373564 2137 ntTSL 5 BASIC12.52□□□□□ -0.41
LTAP01374 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
LTAP01374 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.51□□□□□ -0.41
LTAP01374 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC12.51□□□□□ -0.41
LTAP01374 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 NORAD-201ENST00000565493 5339 ntBASIC12.51□□□□□ -0.41
LTAP01374 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC12.51□□□□□ -0.41
LTAP01374 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC12.51□□□□□ -0.41
LTAP01374 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC12.51□□□□□ -0.41
LTAP01374 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
LTAP01374 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC12.51□□□□□ -0.41
LTAP01374 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
LTAP01374 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
LTAP01374 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms