Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13□□□□□ -0.33
ZNF253O75346 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC13□□□□□ -0.33
ZNF253O75346 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13□□□□□ -0.33
ZNF253O75346 NKTR-203ENST00000442970 646 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13□□□□□ -0.33
ZNF253O75346 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13□□□□□ -0.33
ZNF253O75346 AL136038.3-201ENST00000561909 1096 ntBASIC13□□□□□ -0.33
ZNF253O75346 COX5A-202ENST00000562233 441 ntTSL 3 BASIC13□□□□□ -0.33
ZNF253O75346 COX5A-204ENST00000567270 579 ntTSL 3 BASIC13□□□□□ -0.33
ZNF253O75346 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13□□□□□ -0.33
ZNF253O75346 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
ZNF253O75346 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
ZNF253O75346 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
ZNF253O75346 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF253O75346 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 USP25-201ENST00000285679 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF253O75346 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
ZNF253O75346 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 HLA-J-202ENST00000469281 1241 ntBASIC12.99□□□□□ -0.33
ZNF253O75346 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC12.99□□□□□ -0.33
ZNF253O75346 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC12.99□□□□□ -0.33
ZNF253O75346 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
ZNF253O75346 AC073592.5-201ENST00000624854 528 ntBASIC12.99□□□□□ -0.33
ZNF253O75346 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF253O75346 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.99□□□□□ -0.33
ZNF253O75346 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
ZNF253O75346 VILL-207ENST00000465644 1857 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF253O75346 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC12.99□□□□□ -0.33
ZNF253O75346 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
ZNF253O75346 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms