Protein–RNA interactions for Protein: Q9UMX0

UBQLN1, Ubiquilin-1, humanhuman

Known RBP Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1Q9UMX0 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 SPTSSB-204ENST00000617024 1292 ntBASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 AC022211.2-201ENST00000585075 2527 ntBASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
UBQLN1Q9UMX0 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 PCGF3-213ENST00000620529 1899 ntBASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 GGT3P-204ENST00000453783 1664 ntBASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 CD81-202ENST00000381036 880 ntTSL 3 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 AC093724.1-201ENST00000448659 1027 ntBASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 AC098859.1-201ENST00000502915 1238 ntBASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
UBQLN1Q9UMX0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 AC106886.4-201ENST00000623557 2502 ntBASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 HLA-H-201ENST00000383620 1096 ntBASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 RARRES2P9-201ENST00000565168 469 ntBASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 AL355385.1-201ENST00000606123 409 ntBASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 MIR6080-201ENST00000617359 66 ntBASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
UBQLN1Q9UMX0 AP3S2-216ENST00000617003 1561 ntBASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms