Protein–RNA interactions for Protein: Q96PC3

AP1S3, AP-1 complex subunit sigma-3, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3Q96PC3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 ECEL1P2-202ENST00000465689 757 ntBASIC12.64□□□□□ -0.39
AP1S3Q96PC3 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 TMED1-207ENST00000591695 809 ntTSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 FAM87A-204ENST00000613235 858 ntBASIC12.64□□□□□ -0.39
AP1S3Q96PC3 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 PRR26-201ENST00000381489 7250 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 PCDHB6-202ENST00000622991 2608 ntTSL 2 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 AMT-250ENST00000637682 1823 ntTSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 TSPAN7-202ENST00000378482 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 PODN-202ENST00000371500 3287 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 CACNA1G-226ENST00000513689 6879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 CACNA1G-231ENST00000515165 6870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
AP1S3Q96PC3 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 ADM-208ENST00000534464 1640 ntTSL 2 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 AC008550.1-201ENST00000511500 884 ntBASIC12.63□□□□□ -0.39
AP1S3Q96PC3 IGHV3-52-201ENST00000519770 353 ntBASIC12.63□□□□□ -0.39
AP1S3Q96PC3 AC124947.2-201ENST00000547118 1133 ntBASIC12.63□□□□□ -0.39
AP1S3Q96PC3 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 SNX21-213ENST00000614929 587 ntTSL 5 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 CLN6-221ENST00000637494 765 ntTSL 5 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC12.63□□□□□ -0.39
AP1S3Q96PC3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 MYO9B-206ENST00000595618 7623 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 LAMB1-201ENST00000222399 5725 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
AP1S3Q96PC3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms