Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 BMP1-204ENST00000397814 836 ntTSL 4 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 AL121906.2-201ENST00000621597 723 ntBASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 TRIOBP-204ENST00000406386 10129 ntAPPRIS ALT2 TSL 5 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 AC010336.1-201ENST00000539278 4739 ntBASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 PLEKHG3-201ENST00000247226 10351 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 MTMR2-201ENST00000346299 4681 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 MTMR2-203ENST00000393223 4681 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 STK32B-201ENST00000282908 3582 ntAPPRIS P1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 RASA4CP-201ENST00000424092 1398 ntBASIC9.12□□□□□ -0.95
SPTSSBQ8NFR3 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 EIF4G1-207ENST00000411531 4683 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 CACNA1F-202ENST00000376251 5813 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 LONRF2-201ENST00000393437 13912 ntAPPRIS P2 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AFDN-206ENST00000392112 7459 ntTSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 SCO1-201ENST00000255390 9612 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 KRT8P32-201ENST00000512863 1461 ntBASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 ITM2B-202ENST00000378565 10137 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AL357033.4-201ENST00000617703 1807 ntBASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AC124283.5-201ENST00000624661 1809 ntBASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AC024257.2-201ENST00000549699 147 ntBASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AC013268.1-206ENST00000638368 961 ntBASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 AC112229.1-201ENST00000639295 961 ntBASIC9.11□□□□□ -0.95
SPTSSBQ8NFR3 PRRC2A-202ENST00000376033 6893 ntAPPRIS P1 TSL 1 (best) BASIC9.11□□□□□ -0.95
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms