Protein–RNA interactions for Protein: Q7RTM1

OTOP1, Otopetrin-1, humanhuman

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OTOP1Q7RTM1 CENPM-206ENST00000407253 818 ntTSL 2 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 AC093004.1-201ENST00000508850 424 ntBASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 AC133552.6-201ENST00000613406 534 ntBASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OTOP1Q7RTM1 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 AC106820.2-201ENST00000563775 3264 ntBASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 FKBPL-201ENST00000375156 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 OSM-203ENST00000403463 464 ntTSL 3 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 PP14571-201ENST00000404327 934 ntTSL 2 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 DOC2GP-202ENST00000514950 1163 ntBASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 LITAF-210ENST00000571976 548 ntTSL 2 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 LITAF-214ENST00000574703 486 ntTSL 2 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 MIR6787-201ENST00000616675 61 ntBASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 GPR182-203ENST00000622922 591 ntBASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 PFAS-212ENST00000625942 396 ntTSL 5 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
OTOP1Q7RTM1 AC060834.1-201ENST00000443027 2032 ntBASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 TOP3BP1-201ENST00000420768 1380 ntBASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC19.08■□□□□ 0.65
OTOP1Q7RTM1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 CCDC182-201ENST00000299415 832 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 HAUS4P1-201ENST00000406739 1145 ntBASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 AL353705.2-201ENST00000428243 662 ntBASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 AC234783.1-201ENST00000441761 496 ntBASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 FUZ-207ENST00000526575 482 ntTSL 4 BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 MIR6775-201ENST00000617557 69 ntBASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 SLC22A20-204ENST00000530038 1673 ntBASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC19.08■□□□□ 0.64
OTOP1Q7RTM1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC19.07■□□□□ 0.64
OTOP1Q7RTM1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms