Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.79□□□□□ -0.04
LHX2P50458 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.79□□□□□ -0.04
LHX2P50458 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
LHX2P50458 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC14.79□□□□□ -0.04
LHX2P50458 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC14.79□□□□□ -0.04
LHX2P50458 FAM86GP-201ENST00000448322 971 ntBASIC14.79□□□□□ -0.04
LHX2P50458 AC093724.1-201ENST00000448659 1027 ntBASIC14.79□□□□□ -0.04
LHX2P50458 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC14.79□□□□□ -0.04
LHX2P50458 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC14.79□□□□□ -0.04
LHX2P50458 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC14.79□□□□□ -0.04
LHX2P50458 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.79□□□□□ -0.04
LHX2P50458 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LHX2P50458 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC14.79□□□□□ -0.04
LHX2P50458 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LHX2P50458 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
LHX2P50458 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LHX2P50458 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LHX2P50458 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LHX2P50458 SPTSSB-204ENST00000617024 1292 ntBASIC14.79□□□□□ -0.04
LHX2P50458 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC14.79□□□□□ -0.04
LHX2P50458 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
LHX2P50458 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
LHX2P50458 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC14.79□□□□□ -0.04
LHX2P50458 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
LHX2P50458 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
LHX2P50458 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
LHX2P50458 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
LHX2P50458 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC14.78□□□□□ -0.04
LHX2P50458 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC14.78□□□□□ -0.04
LHX2P50458 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.78□□□□□ -0.04
LHX2P50458 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 GGT3P-204ENST00000453783 1664 ntBASIC14.78□□□□□ -0.04
LHX2P50458 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
LHX2P50458 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC14.78□□□□□ -0.04
LHX2P50458 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC14.78□□□□□ -0.04
LHX2P50458 SPDYE7P-202ENST00000420373 878 ntBASIC14.78□□□□□ -0.04
LHX2P50458 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC14.78□□□□□ -0.04
LHX2P50458 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
LHX2P50458 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 AC067863.1-201ENST00000494933 530 ntBASIC14.78□□□□□ -0.04
LHX2P50458 RARRES2P9-201ENST00000565168 469 ntBASIC14.78□□□□□ -0.04
LHX2P50458 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC14.78□□□□□ -0.04
LHX2P50458 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 FHL2-212ENST00000607522 759 ntTSL 2 BASIC14.78□□□□□ -0.04
LHX2P50458 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.78□□□□□ -0.04
LHX2P50458 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC14.78□□□□□ -0.04
LHX2P50458 PCGF3-213ENST00000620529 1899 ntBASIC14.78□□□□□ -0.04
LHX2P50458 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC14.78□□□□□ -0.04
LHX2P50458 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
LHX2P50458 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.77□□□□□ -0.04
LHX2P50458 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
LHX2P50458 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 AC008677.1-201ENST00000519230 1561 ntBASIC14.77□□□□□ -0.04
LHX2P50458 AP3S2-216ENST00000617003 1561 ntBASIC14.77□□□□□ -0.04
LHX2P50458 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.77□□□□□ -0.04
LHX2P50458 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC14.77□□□□□ -0.04
LHX2P50458 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC14.77□□□□□ -0.04
LHX2P50458 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
LHX2P50458 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 TUBB3P1-201ENST00000405796 1332 ntBASIC14.77□□□□□ -0.04
LHX2P50458 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC14.77□□□□□ -0.04
LHX2P50458 UBALD1-205ENST00000590891 2641 ntBASIC14.77□□□□□ -0.04
LHX2P50458 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.77□□□□□ -0.05
LHX2P50458 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC14.77□□□□□ -0.05
LHX2P50458 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC14.77□□□□□ -0.05
LHX2P50458 AC098859.1-201ENST00000502915 1238 ntBASIC14.77□□□□□ -0.05
LHX2P50458 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC14.77□□□□□ -0.05
LHX2P50458 AC051619.7-201ENST00000568314 623 ntBASIC14.77□□□□□ -0.05
LHX2P50458 AC093512.1-201ENST00000617969 520 ntBASIC14.77□□□□□ -0.05
LHX2P50458 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC14.77□□□□□ -0.05
LHX2P50458 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
LHX2P50458 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms