Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6BP35913 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6BP35913 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
PDE6BP35913 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6BP35913 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6BP35913 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6BP35913 KCNV2-201ENST00000382082 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PDE6BP35913 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.26■□□□□ 0.83
PDE6BP35913 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
PDE6BP35913 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
PDE6BP35913 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE6BP35913 FAM86MP-201ENST00000340703 885 ntBASIC20.26■□□□□ 0.83
PDE6BP35913 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
PDE6BP35913 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 RHOA-206ENST00000454011 889 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE6BP35913 PACS1-203ENST00000524815 628 ntTSL 4 BASIC20.26■□□□□ 0.83
PDE6BP35913 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
PDE6BP35913 MIR8072-201ENST00000614241 80 ntBASIC20.26■□□□□ 0.83
PDE6BP35913 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC20.26■□□□□ 0.83
PDE6BP35913 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PDE6BP35913 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC20.26■□□□□ 0.83
PDE6BP35913 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
PDE6BP35913 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDE6BP35913 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
PDE6BP35913 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 TNNI1-203ENST00000367312 1100 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.25■□□□□ 0.83
PDE6BP35913 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC20.25■□□□□ 0.83
PDE6BP35913 FAM8A2P-201ENST00000528813 1142 ntBASIC20.25■□□□□ 0.83
PDE6BP35913 TIMM17BP1-201ENST00000545713 516 ntBASIC20.25■□□□□ 0.83
PDE6BP35913 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.25■□□□□ 0.83
PDE6BP35913 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.25■□□□□ 0.83
PDE6BP35913 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 AC074044.1-201ENST00000609673 707 ntBASIC20.25■□□□□ 0.83
PDE6BP35913 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 AL139011.1-202ENST00000642063 584 ntBASIC20.25■□□□□ 0.83
PDE6BP35913 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
PDE6BP35913 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.25■□□□□ 0.83
PDE6BP35913 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PDE6BP35913 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
PDE6BP35913 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20.24■□□□□ 0.83
PDE6BP35913 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.24■□□□□ 0.83
PDE6BP35913 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 RAD18-204ENST00000418463 563 ntTSL 4 BASIC20.24■□□□□ 0.83
PDE6BP35913 RAD18-205ENST00000421052 582 ntTSL 3 BASIC20.24■□□□□ 0.83
PDE6BP35913 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC20.24■□□□□ 0.83
PDE6BP35913 AC104989.1-201ENST00000519711 778 ntBASIC20.24■□□□□ 0.83
PDE6BP35913 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC20.24■□□□□ 0.83
PDE6BP35913 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC20.24■□□□□ 0.83
PDE6BP35913 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.24■□□□□ 0.83
PDE6BP35913 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
PDE6BP35913 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC20.24■□□□□ 0.83
PDE6BP35913 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.24■□□□□ 0.83
PDE6BP35913 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
PDE6BP35913 RHBDF1P1-201ENST00000427504 1941 ntBASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms