Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2AO43633 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP2AO43633 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP2AO43633 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CHMP2AO43633 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP2AO43633 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 AC005237.2-201ENST00000434368 219 ntBASIC18.67■□□□□ 0.58
CHMP2AO43633 SPCS2P4-201ENST00000436160 681 ntBASIC18.67■□□□□ 0.58
CHMP2AO43633 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2AO43633 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP2AO43633 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2AO43633 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP2AO43633 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2AO43633 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2AO43633 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 AC006538.1-201ENST00000567905 1585 ntBASIC18.67■□□□□ 0.58
CHMP2AO43633 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 SERPINB6-201ENST00000335686 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CHMP2AO43633 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC18.67■□□□□ 0.58
CHMP2AO43633 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CHMP2AO43633 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.67■□□□□ 0.58
CHMP2AO43633 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC18.67■□□□□ 0.58
CHMP2AO43633 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP2AO43633 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
CHMP2AO43633 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CHMP2AO43633 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP2AO43633 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP2AO43633 METTL21AP1-201ENST00000438852 635 ntBASIC18.66■□□□□ 0.58
CHMP2AO43633 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP2AO43633 AC069335.1-201ENST00000489972 472 ntBASIC18.66■□□□□ 0.58
CHMP2AO43633 IGHV3-62-201ENST00000520057 340 ntBASIC18.66■□□□□ 0.58
CHMP2AO43633 AC093520.2-201ENST00000561830 333 ntBASIC18.66■□□□□ 0.58
CHMP2AO43633 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.66■□□□□ 0.58
CHMP2AO43633 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CHMP2AO43633 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP2AO43633 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.66■□□□□ 0.58
CHMP2AO43633 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
CHMP2AO43633 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.66■□□□□ 0.58
CHMP2AO43633 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.65■□□□□ 0.58
CHMP2AO43633 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP2AO43633 UXT-AS1-201ENST00000590504 1525 ntBASIC18.65■□□□□ 0.58
CHMP2AO43633 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CHMP2AO43633 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CHMP2AO43633 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CHMP2AO43633 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CHMP2AO43633 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP2AO43633 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2AO43633 LBH-203ENST00000404397 543 ntTSL 4 BASIC18.65■□□□□ 0.58
CHMP2AO43633 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2AO43633 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP2AO43633 KRT18P34-201ENST00000488218 1270 ntBASIC18.65■□□□□ 0.58
CHMP2AO43633 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2AO43633 AL138918.1-201ENST00000568306 659 ntBASIC18.65■□□□□ 0.58
CHMP2AO43633 RPS15-207ENST00000591032 550 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP2AO43633 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP2AO43633 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP2AO43633 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms