Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC7O00311 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CDC7O00311 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.33■□□□□ 0.2
CDC7O00311 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CDC7O00311 AC009078.2-202ENST00000463353 338 ntBASIC16.33■□□□□ 0.2
CDC7O00311 UNC93B6-202ENST00000528242 690 ntBASIC16.33■□□□□ 0.2
CDC7O00311 POLD4-207ENST00000531239 584 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC7O00311 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.33■□□□□ 0.2
CDC7O00311 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC7O00311 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.33■□□□□ 0.2
CDC7O00311 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CDC7O00311 SLC25A6P4-201ENST00000586535 553 ntBASIC16.33■□□□□ 0.2
CDC7O00311 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC7O00311 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CDC7O00311 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 AGK-211ENST00000629555 2765 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC7O00311 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC7O00311 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC16.33■□□□□ 0.2
CDC7O00311 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC7O00311 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.33■□□□□ 0.2
CDC7O00311 PCGF3-213ENST00000620529 1899 ntBASIC16.33■□□□□ 0.2
CDC7O00311 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CDC7O00311 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC7O00311 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC7O00311 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC7O00311 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC7O00311 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC7O00311 PRSS29P-201ENST00000440800 595 ntBASIC16.32■□□□□ 0.2
CDC7O00311 AC009947.1-201ENST00000444350 727 ntBASIC16.32■□□□□ 0.2
CDC7O00311 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 CXCL1P1-201ENST00000502804 216 ntBASIC16.32■□□□□ 0.2
CDC7O00311 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC7O00311 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.32■□□□□ 0.2
CDC7O00311 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC7O00311 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC7O00311 AP001005.1-201ENST00000571755 1248 ntBASIC16.32■□□□□ 0.2
CDC7O00311 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC7O00311 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC7O00311 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC16.32■□□□□ 0.2
CDC7O00311 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDC7O00311 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC16.32■□□□□ 0.2
CDC7O00311 MTHFR-217ENST00000641820 1569 ntBASIC16.32■□□□□ 0.2
CDC7O00311 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
CDC7O00311 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CDC7O00311 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CDC7O00311 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC7O00311 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC7O00311 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC7O00311 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC7O00311 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CDC7O00311 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC7O00311 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC7O00311 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC7O00311 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.31■□□□□ 0.2
CDC7O00311 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CDC7O00311 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.31■□□□□ 0.2
CDC7O00311 IGLL3P-201ENST00000412472 434 ntBASIC16.31■□□□□ 0.2
CDC7O00311 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC7O00311 RNA5SP415-201ENST00000517246 115 ntBASIC16.31■□□□□ 0.2
CDC7O00311 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC16.31■□□□□ 0.2
CDC7O00311 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
CDC7O00311 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.31■□□□□ 0.2
CDC7O00311 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC16.31■□□□□ 0.2
CDC7O00311 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CDC7O00311 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CDC7O00311 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CDC7O00311 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms