Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AC002056.1-201ENST00000395613 760 ntBASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AC092474.2-201ENST00000424288 719 ntBASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AC021097.1-201ENST00000607902 574 ntBASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AC091812.2-201ENST00000619081 385 ntBASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 AL031731.1-201ENST00000642131 2094 ntBASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
RAI2Q9Y5P3 GUCY1A2-202ENST00000347596 2532 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 FAM58CP-201ENST00000435741 640 ntBASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 AC112191.1-201ENST00000523689 701 ntBASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 AL078644.1-201ENST00000609881 752 ntBASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 C20orf181-201ENST00000623918 480 ntBASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.81■□□□□ 0.28
RAI2Q9Y5P3 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
RAI2Q9Y5P3 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC16.79■□□□□ 0.28
RAI2Q9Y5P3 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms