Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.85■□□□□ 0.29
POLR1EQ9GZS1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 PCGF3-213ENST00000620529 1899 ntBASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 AC091812.2-201ENST00000619081 385 ntBASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
POLR1EQ9GZS1 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLR1EQ9GZS1 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
POLR1EQ9GZS1 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
POLR1EQ9GZS1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.83■□□□□ 0.29
POLR1EQ9GZS1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.83■□□□□ 0.28
POLR1EQ9GZS1 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 ALOX12P2-203ENST00000570921 1945 ntBASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 LINC01144-201ENST00000626198 1710 ntBASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 AC099398.1-201ENST00000567919 2776 ntBASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC16.82■□□□□ 0.28
POLR1EQ9GZS1 COX10-202ENST00000429152 875 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms