Protein–RNA interactions for Protein: Q8IVU1

IGDCC3, Immunoglobulin superfamily DCC subclass member 3, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC3Q8IVU1 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 MYB-242ENST00000618728 3545 ntTSL 5 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 CDS1-201ENST00000295887 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 RPS2P1-201ENST00000434010 821 ntBASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 PRELID1P1-202ENST00000567272 903 ntBASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 CYP51A1P2-201ENST00000419457 1499 ntBASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.8■□□□□ 0.28
IGDCC3Q8IVU1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 LINC01144-201ENST00000626198 1710 ntBASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 HLA-DQB2-231ENST00000435145 2026 ntBASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 AC006557.2-201ENST00000592985 1240 ntBASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
IGDCC3Q8IVU1 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 VILL-207ENST00000465644 1857 ntTSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 UNC93B7-201ENST00000509439 705 ntBASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 MMP17-203ENST00000535004 719 ntTSL 3 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 AC087641.1-201ENST00000557561 1021 ntBASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 RIN3-211ENST00000557762 517 ntTSL 3 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 CYB561-216ENST00000582297 897 ntTSL 3 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.78■□□□□ 0.28
IGDCC3Q8IVU1 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
IGDCC3Q8IVU1 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms