Protein–RNA interactions for Protein: P51956

NEK3, Serine/threonine-protein kinase Nek3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3P51956 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
NEK3P51956 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.19■□□□□ 0.34
NEK3P51956 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
NEK3P51956 CXCL1P1-201ENST00000502804 216 ntBASIC17.19■□□□□ 0.34
NEK3P51956 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.19■□□□□ 0.34
NEK3P51956 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
NEK3P51956 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.19■□□□□ 0.34
NEK3P51956 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.19■□□□□ 0.34
NEK3P51956 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
NEK3P51956 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 AL513523.2-202ENST00000427283 2040 ntBASIC17.19■□□□□ 0.34
NEK3P51956 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.19■□□□□ 0.34
NEK3P51956 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.19■□□□□ 0.34
NEK3P51956 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
NEK3P51956 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.19■□□□□ 0.34
NEK3P51956 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.19■□□□□ 0.34
NEK3P51956 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.18■□□□□ 0.34
NEK3P51956 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NEK3P51956 STK32C-204ENST00000368622 2010 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 FRMD8P1-201ENST00000440433 1524 ntBASIC17.18■□□□□ 0.34
NEK3P51956 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC17.18■□□□□ 0.34
NEK3P51956 MCCD1P2-201ENST00000423228 335 ntBASIC17.18■□□□□ 0.34
NEK3P51956 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.18■□□□□ 0.34
NEK3P51956 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC17.18■□□□□ 0.34
NEK3P51956 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.18■□□□□ 0.34
NEK3P51956 AC092865.6-201ENST00000642101 219 ntBASIC17.18■□□□□ 0.34
NEK3P51956 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
NEK3P51956 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
NEK3P51956 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
NEK3P51956 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 BCAR1-209ENST00000546196 1340 ntBASIC17.18■□□□□ 0.34
NEK3P51956 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
NEK3P51956 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC17.18■□□□□ 0.34
NEK3P51956 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
NEK3P51956 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.18■□□□□ 0.34
NEK3P51956 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 SPATS2L-202ENST00000360760 2119 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 LINC00487-201ENST00000382045 2131 ntTSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.17■□□□□ 0.34
NEK3P51956 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 HLA-A-202ENST00000376806 1854 ntBASIC17.17■□□□□ 0.34
NEK3P51956 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 RHOQP3-201ENST00000437982 621 ntBASIC17.17■□□□□ 0.34
NEK3P51956 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC17.17■□□□□ 0.34
NEK3P51956 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC17.17■□□□□ 0.34
NEK3P51956 SLC25A6P2-201ENST00000497974 877 ntBASIC17.17■□□□□ 0.34
NEK3P51956 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.17■□□□□ 0.34
NEK3P51956 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.17■□□□□ 0.34
NEK3P51956 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
NEK3P51956 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC17.17■□□□□ 0.34
NEK3P51956 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.17■□□□□ 0.34
NEK3P51956 AL513190.1-201ENST00000621254 727 ntBASIC17.17■□□□□ 0.34
NEK3P51956 AC004877.2-201ENST00000623941 599 ntBASIC17.17■□□□□ 0.34
NEK3P51956 AC007064.4-201ENST00000637740 555 ntBASIC17.17■□□□□ 0.34
NEK3P51956 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC17.17■□□□□ 0.34
NEK3P51956 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.17■□□□□ 0.34
NEK3P51956 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.17■□□□□ 0.34
NEK3P51956 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
NEK3P51956 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NEK3P51956 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms