Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
CKS2P33552 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 AL135999.2-201ENST00000622438 1686 ntBASIC12.3□□□□□ -0.44
CKS2P33552 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
CKS2P33552 SRP19-202ENST00000445150 833 ntTSL 2 BASIC12.3□□□□□ -0.44
CKS2P33552 AC068472.1-201ENST00000474589 881 ntBASIC12.3□□□□□ -0.44
CKS2P33552 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC12.3□□□□□ -0.44
CKS2P33552 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.3□□□□□ -0.44
CKS2P33552 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC12.3□□□□□ -0.44
CKS2P33552 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
CKS2P33552 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC12.3□□□□□ -0.44
CKS2P33552 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
CKS2P33552 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC12.3□□□□□ -0.44
CKS2P33552 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CKS2P33552 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC12.3□□□□□ -0.44
CKS2P33552 SP100-205ENST00000409824 1802 ntTSL 5 BASIC12.3□□□□□ -0.44
CKS2P33552 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
CKS2P33552 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC12.3□□□□□ -0.44
CKS2P33552 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 PRAL-201ENST00000624952 3286 ntBASIC12.29□□□□□ -0.44
CKS2P33552 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 AC245052.4-201ENST00000452097 4158 ntTSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 RBM17P1-201ENST00000453646 1190 ntBASIC12.29□□□□□ -0.44
CKS2P33552 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC12.29□□□□□ -0.44
CKS2P33552 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 FITM1-202ENST00000559294 800 ntBASIC12.29□□□□□ -0.44
CKS2P33552 AP003071.4-201ENST00000562276 1284 ntBASIC12.29□□□□□ -0.44
CKS2P33552 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 AL049637.2-201ENST00000641778 930 ntBASIC12.29□□□□□ -0.44
CKS2P33552 CDCA5-201ENST00000275517 2587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 SUPT20HL2-201ENST00000486479 2409 ntBASIC12.29□□□□□ -0.44
CKS2P33552 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC12.29□□□□□ -0.44
CKS2P33552 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 AC002310.6-201ENST00000624451 1377 ntBASIC12.29□□□□□ -0.44
CKS2P33552 AL021920.2-201ENST00000624828 1351 ntBASIC12.29□□□□□ -0.44
CKS2P33552 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC12.29□□□□□ -0.44
CKS2P33552 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC12.29□□□□□ -0.44
CKS2P33552 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CKS2P33552 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC12.28□□□□□ -0.44
CKS2P33552 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.28□□□□□ -0.44
CKS2P33552 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 LEF1-202ENST00000379951 3477 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CKS2P33552 TSPY14P-201ENST00000303979 915 ntBASIC12.28□□□□□ -0.44
CKS2P33552 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms