Protein–RNA interactions for Protein: P18846

ATF1, Cyclic AMP-dependent transcription factor ATF-1, humanhuman

Predictions only

Length 271 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF1P18846 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC14.66□□□□□ -0.06
ATF1P18846 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 AL021920.2-201ENST00000624828 1351 ntBASIC14.66□□□□□ -0.06
ATF1P18846 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 TLE1-202ENST00000376484 666 ntTSL 3 BASIC14.66□□□□□ -0.06
ATF1P18846 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.66□□□□□ -0.06
ATF1P18846 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 AC012615.1-201ENST00000565797 1299 ntBASIC14.66□□□□□ -0.06
ATF1P18846 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.66□□□□□ -0.06
ATF1P18846 MIR5100-201ENST00000579544 119 ntBASIC14.66□□□□□ -0.06
ATF1P18846 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC14.66□□□□□ -0.06
ATF1P18846 AC099336.1-202ENST00000602961 463 ntBASIC14.66□□□□□ -0.06
ATF1P18846 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 BCL10-202ENST00000620248 774 ntTSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 AC004817.3-201ENST00000602957 2129 ntBASIC14.66□□□□□ -0.06
ATF1P18846 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.66□□□□□ -0.06
ATF1P18846 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.66□□□□□ -0.06
ATF1P18846 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
ATF1P18846 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC14.66□□□□□ -0.06
ATF1P18846 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC14.66□□□□□ -0.06
ATF1P18846 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.66□□□□□ -0.06
ATF1P18846 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
ATF1P18846 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
ATF1P18846 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC14.65□□□□□ -0.06
ATF1P18846 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 AC079776.2-201ENST00000641154 1609 ntBASIC14.65□□□□□ -0.06
ATF1P18846 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
ATF1P18846 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
ATF1P18846 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.65□□□□□ -0.06
ATF1P18846 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 AC073347.1-201ENST00000421633 2643 ntBASIC14.64□□□□□ -0.07
ATF1P18846 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
ATF1P18846 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
ATF1P18846 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
ATF1P18846 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms