Protein–RNA interactions for Protein: P0C221

CCDC175, Coiled-coil domain-containing protein 175, humanhuman

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC175P0C221 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC175P0C221 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC175P0C221 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC18.03■□□□□ 0.48
CCDC175P0C221 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CCDC175P0C221 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC175P0C221 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC175P0C221 AL512652.2-201ENST00000625156 1716 ntBASIC18.03■□□□□ 0.48
CCDC175P0C221 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.03■□□□□ 0.48
CCDC175P0C221 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CCDC175P0C221 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC175P0C221 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CCDC175P0C221 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 AL031731.1-201ENST00000642131 2094 ntBASIC18.02■□□□□ 0.48
CCDC175P0C221 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC175P0C221 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC175P0C221 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.02■□□□□ 0.48
CCDC175P0C221 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
CCDC175P0C221 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC18.02■□□□□ 0.48
CCDC175P0C221 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC175P0C221 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.02■□□□□ 0.48
CCDC175P0C221 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC18.02■□□□□ 0.48
CCDC175P0C221 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC18.02■□□□□ 0.48
CCDC175P0C221 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CCDC175P0C221 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC175P0C221 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC175P0C221 DBN1-202ENST00000309007 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC175P0C221 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
CCDC175P0C221 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.02■□□□□ 0.47
CCDC175P0C221 AC243591.1-201ENST00000452967 1364 ntBASIC18.02■□□□□ 0.47
CCDC175P0C221 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC175P0C221 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC175P0C221 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC18.02■□□□□ 0.47
CCDC175P0C221 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CCDC175P0C221 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC18.02■□□□□ 0.47
CCDC175P0C221 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CCDC175P0C221 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC175P0C221 TP73-AS1-210ENST00000637775 1455 ntBASIC18.01■□□□□ 0.47
CCDC175P0C221 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC175P0C221 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC175P0C221 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC175P0C221 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC175P0C221 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 LINC00982-205ENST00000420957 435 ntBASIC18.01■□□□□ 0.47
CCDC175P0C221 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
CCDC175P0C221 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC175P0C221 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.01■□□□□ 0.47
CCDC175P0C221 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.01■□□□□ 0.47
CCDC175P0C221 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 AC091607.1-201ENST00000490318 1060 ntBASIC18.01■□□□□ 0.47
CCDC175P0C221 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC175P0C221 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC175P0C221 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC18.01■□□□□ 0.47
CCDC175P0C221 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.01■□□□□ 0.47
CCDC175P0C221 TERC-201ENST00000602385 541 ntBASIC18.01■□□□□ 0.47
CCDC175P0C221 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.01■□□□□ 0.47
CCDC175P0C221 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC175P0C221 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC175P0C221 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
CCDC175P0C221 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.01■□□□□ 0.47
CCDC175P0C221 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
CCDC175P0C221 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CCDC175P0C221 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC18■□□□□ 0.47
CCDC175P0C221 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCDC175P0C221 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CCDC175P0C221 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC175P0C221 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC175P0C221 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18■□□□□ 0.47
CCDC175P0C221 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC175P0C221 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC18■□□□□ 0.47
CCDC175P0C221 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CCDC175P0C221 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18■□□□□ 0.47
CCDC175P0C221 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18■□□□□ 0.47
CCDC175P0C221 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC18■□□□□ 0.47
CCDC175P0C221 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC175P0C221 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CCDC175P0C221 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC18■□□□□ 0.47
CCDC175P0C221 SPDYE21P-201ENST00000413323 827 ntBASIC18■□□□□ 0.47
CCDC175P0C221 AK4P3-201ENST00000418260 669 ntBASIC18■□□□□ 0.47
CCDC175P0C221 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms