Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
APOA4P06727 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.73■□□□□ 0.27
APOA4P06727 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
APOA4P06727 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 AL162727.3-201ENST00000635661 2787 ntBASIC16.72■□□□□ 0.27
APOA4P06727 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.72■□□□□ 0.27
APOA4P06727 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 AC109309.1-201ENST00000418995 435 ntTSL 3 BASIC16.72■□□□□ 0.27
APOA4P06727 AC087163.2-201ENST00000457299 853 ntBASIC16.72■□□□□ 0.27
APOA4P06727 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC16.72■□□□□ 0.27
APOA4P06727 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 AL049840.3-201ENST00000602669 611 ntBASIC16.72■□□□□ 0.27
APOA4P06727 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.72■□□□□ 0.27
APOA4P06727 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC16.72■□□□□ 0.27
APOA4P06727 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
APOA4P06727 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.72■□□□□ 0.27
APOA4P06727 HLA-A-201ENST00000376802 1334 ntBASIC16.71■□□□□ 0.27
APOA4P06727 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
APOA4P06727 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
APOA4P06727 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.71■□□□□ 0.27
APOA4P06727 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC16.71■□□□□ 0.27
APOA4P06727 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
APOA4P06727 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.71■□□□□ 0.27
APOA4P06727 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.71■□□□□ 0.27
APOA4P06727 RNA5SP419-201ENST00000515908 135 ntBASIC16.71■□□□□ 0.27
APOA4P06727 IGHV3-65-201ENST00000523210 341 ntBASIC16.71■□□□□ 0.27
APOA4P06727 LITAF-211ENST00000572255 516 ntTSL 4 BASIC16.71■□□□□ 0.27
APOA4P06727 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
APOA4P06727 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.71■□□□□ 0.27
APOA4P06727 MON2-201ENST00000393629 5612 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
APOA4P06727 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC16.71■□□□□ 0.27
APOA4P06727 LINC02199-201ENST00000506655 2702 ntBASIC16.71■□□□□ 0.27
APOA4P06727 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
APOA4P06727 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
APOA4P06727 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
APOA4P06727 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
APOA4P06727 AC092364.2-201ENST00000596710 2692 ntBASIC16.71■□□□□ 0.26
APOA4P06727 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.26
APOA4P06727 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.71■□□□□ 0.26
APOA4P06727 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
APOA4P06727 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 AC006277.1-201ENST00000624348 1610 ntBASIC16.7■□□□□ 0.26
APOA4P06727 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 AC079328.2-201ENST00000561241 3354 ntBASIC16.7■□□□□ 0.26
APOA4P06727 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
APOA4P06727 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC16.7■□□□□ 0.26
APOA4P06727 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC16.7■□□□□ 0.26
APOA4P06727 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
APOA4P06727 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms