Protein–RNA interactions for Protein: O15050

TRANK1, TPR and ankyrin repeat-containing protein 1, humanhuman

Predictions only

Length 2,925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRANK1O15050 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 AC006277.1-201ENST00000624348 1610 ntBASIC17.16■□□□□ 0.34
TRANK1O15050 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC17.16■□□□□ 0.34
TRANK1O15050 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC17.16■□□□□ 0.34
TRANK1O15050 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC17.16■□□□□ 0.34
TRANK1O15050 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC17.16■□□□□ 0.34
TRANK1O15050 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.16■□□□□ 0.34
TRANK1O15050 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRANK1O15050 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRANK1O15050 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 MIR663B-201ENST00000408361 115 ntBASIC17.16■□□□□ 0.34
TRANK1O15050 ACTG1P3-201ENST00000431775 1114 ntBASIC17.16■□□□□ 0.34
TRANK1O15050 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.16■□□□□ 0.34
TRANK1O15050 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRANK1O15050 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.16■□□□□ 0.34
TRANK1O15050 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.16■□□□□ 0.34
TRANK1O15050 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 PRKN-201ENST00000338468 1276 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC17.15■□□□□ 0.34
TRANK1O15050 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 PFN1P12-201ENST00000455938 534 ntBASIC17.15■□□□□ 0.34
TRANK1O15050 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC17.15■□□□□ 0.34
TRANK1O15050 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
TRANK1O15050 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.15■□□□□ 0.34
TRANK1O15050 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 LINC00593-202ENST00000560853 1483 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 AL031731.1-201ENST00000642131 2094 ntBASIC17.15■□□□□ 0.34
TRANK1O15050 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC17.15■□□□□ 0.34
TRANK1O15050 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC17.15■□□□□ 0.34
TRANK1O15050 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC17.15■□□□□ 0.34
TRANK1O15050 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRANK1O15050 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
TRANK1O15050 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.14■□□□□ 0.33
TRANK1O15050 AL442647.2-201ENST00000429864 857 ntBASIC17.14■□□□□ 0.33
TRANK1O15050 TDH-203ENST00000531764 1110 ntBASIC17.14■□□□□ 0.33
TRANK1O15050 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.14■□□□□ 0.33
TRANK1O15050 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.14■□□□□ 0.33
TRANK1O15050 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.14■□□□□ 0.33
TRANK1O15050 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.14■□□□□ 0.33
TRANK1O15050 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC17.14■□□□□ 0.33
TRANK1O15050 REEP1-202ENST00000453231 940 ntTSL 2 BASIC17.14■□□□□ 0.33
TRANK1O15050 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC17.14■□□□□ 0.33
TRANK1O15050 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC17.14■□□□□ 0.33
TRANK1O15050 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TRANK1O15050 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC17.14■□□□□ 0.33
TRANK1O15050 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC17.14■□□□□ 0.33
TRANK1O15050 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRANK1O15050 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC17.14■□□□□ 0.33
TRANK1O15050 AC036164.1-201ENST00000570544 333 ntBASIC17.14■□□□□ 0.33
TRANK1O15050 RN7SL560P-201ENST00000577943 264 ntBASIC17.14■□□□□ 0.33
TRANK1O15050 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC17.14■□□□□ 0.33
TRANK1O15050 AC106872.11-201ENST00000605838 421 ntBASIC17.14■□□□□ 0.33
TRANK1O15050 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.14■□□□□ 0.33
TRANK1O15050 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRANK1O15050 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRANK1O15050 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRANK1O15050 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRANK1O15050 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRANK1O15050 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRANK1O15050 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRANK1O15050 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRANK1O15050 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.13■□□□□ 0.33
TRANK1O15050 AC020765.3-201ENST00000613051 740 ntBASIC17.13■□□□□ 0.33
TRANK1O15050 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms